Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1158 ATGGCGGCGGACGATCTTCCTGCTCAGAGTGTAGCAAGGTCGACAGCGGCAAATTCCTTGGAGAAGCGACACCGTTCCATGTTCGAACTCCCGCCTGACTTTTTTCACTCCTGCCGCCTCCTTGCTTCTACTCAATTATCCGCTTCCGACAACCTTCAGAATTGCAATGACACAGTCCACGAAACCCTTGACCTTATTGAGAACGATGCTAATAGATCCCAAGACGTCGTTGTTTCAATGCCCAGGTGGACTTGCAATACTTGCAAGGATCAATTTGAATCCCTTCAAGACCAGCGTTTGCATTTCAAATCGGATATCCATCGGTTCAATGTGAAGTTGACAATGGCTGGAAAGAATATTGTGAAGGAAGAAGATTTTGAGCTTTTGACATCTGATTCTATTAGAGACTATGATGTTTCAAGTATATCAGGATCAGAAGATGATGATGATGAAAACAAAATTGAAACTCAGAGACAAAATGTTCGTAACAAATTAAGTGAAAGTTTTAGGCAAAAGCTATTTATCCGCATTACGACAGGGGAGAGAGTCTCTGTTTGGAAGTGCTTAATAATGAATATGGGTGAGAATGTACTGAATGAGAACGAAGTGATCGAGAGGTTGAAGTCTTTGACTCTTGAGCGCAGGAATAATTCTCGCTTGAGAATTGTGCTTCTTGCATCTGGTGGGCATTTTGCAGGTTGTGTGTTTGATGGTGACGAGCTTGTGGCTCACAAGACATTTCACAGAAAGTCACGTGGGAGTGCTATACTATCCCCTGAGAAAGAAAGTGAAATCTTTGGAAGTCAAGGGGCGTTGCTTTTGCTGAATGAAAAATTCAACTTTTCACATCATTGGAAGTCATCCTTTGCACCCATAGGAGCATTGAGAGAATATGTTGTGAGGGCCAAGGCAGGGAAAAAACAGTCATCGAAAGATGCTACTGGAAGAGCTGCCCATTCTGCTGGGGCTTCACTCCGTCGCCACAATGAACTTGCATTAAAGAAGCCGCTAAAGTTTAGTCCATTGAGATCCATTGACAAAGAGGCCTTTACAAACTTAGATAGCAAGGATAAAAGTGAGGCTTGTTTGAGTAAACAAGATAATATTGAACTCCTTATTTCAAGTGCGAGTGAGAGTGAAGATGGGATAGTAGGTAAATCAACTCCTTTACATCAAGCCTCACAATCTGGTGACTGTCACAAGGTTTTGGAGCTACTGGAACAGAGCATGGATCCCTACATCAAAGATGAAAGAGGAAGGACCCCTTATATGTTGGCGCATGATAAGGAAGTGAGGAATACTTTTAGAAGGTTCATGGCATCAAACCTTGAAAAATGGGATTGGCATGCAGCAAAAGTGCCTAGTGCATTGACCAAAGAAATGGAAGAATCACAAGCAGTTAAGCAGATTGTTGTTGTTGTTACTTTGGCTGAAAAAGATGCCAAGAGAAAAGCCAGAGCAAAAGAATTAAAAAAATTACGTAAAGCAAAAGAAAAAAAGGCTCAGGCTGAAGCTTCCAAAACTGAAGAAAACCAAGTGAATGCTTCAACTTCTATTCAGAAAGGACAATCTCAACCCAACAGTGGGTTGAAATTATCTAAAGAGGAGGAATTGAGAAGAGCTCAGGCTGAAGAAAGAGAGAAGAGAGCAGCAGCTGCAGAGAGAAGGCTTGCTGCCCTCAAGATTCAAGGGGGCAGTGCAACCACCGTCCCGGTCACTTCAGAACCAAAAAGTGGAGCAGCCGGCGACATATATTGTTCCTGTTGTAATGCCTCACTTGCCGGTAAAGTTCCATTCCACAGGTATAATTATAAATACTGCAGCACTTCATGCATGCATGTCCACAGGGAGATCTTAGAGGATGGGTGA 1869 0.428 MAADDLPAQSVARSTAANSLEKRHRSMFELPPDFFHSCRLLASTQLSASDNLQNCNDTVHETLDLIENDANRSQDVVVSMPRWTCNTCKDQFESLQDQRLHFKSDIHRFNVKLTMAGKNIVKEEDFELLTSDSIRDYDVSSISGSEDDDDENKIETQRQNVRNKLSESFRQKLFIRITTGERVSVWKCLIMNMGENVLNENEVIERLKSLTLERRNNSRLRIVLLASGGHFAGCVFDGDELVAHKTFHRKSRGSAILSPEKESEIFGSQGALLLLNEKFNFSHHWKSSFAPIGALREYVVRAKAGKKQSSKDATGRAAHSAGASLRRHNELALKKPLKFSPLRSIDKEAFTNLDSKDKSEACLSKQDNIELLISSASESEDGIVGKSTPLHQASQSGDCHKVLELLEQSMDPYIKDERGRTPYMLAHDKEVRNTFRRFMASNLEKWDWHAAKVPSALTKEMEESQAVKQIVVVVTLAEKDAKRKARAKELKKLRKAKEKKAQAEASKTEENQVNASTSIQKGQSQPNSGLKLSKEEELRRAQAEEREKRAAAAERRLAALKIQGGSATTVPVTSEPKSGAAGDIYCSCCNASLAGKVPFHRYNYKYCSTSCMHVHREILEDG 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1158 622 Coils Coil 531 563 - -
Alju05g1158 622 Pfam Vms1-associating treble clef domain 585 617 IPR041540 -
Alju05g1158 622 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 297 335 IPR047139 -
Alju05g1158 622 SUPERFAMILY Ankyrin repeat 367 438 IPR036770 -
Alju05g1158 622 MobiDBLite consensus disorder prediction 532 548 - -
Alju05g1158 622 MobiDBLite consensus disorder prediction 507 531 - -
Alju05g1158 622 Coils Coil 479 513 - -
Alju05g1158 622 ProSitePatterns Zinc finger C2H2 type domain signature. 85 107 IPR013087 -
Alju05g1158 622 Gene3D - 348 464 IPR036770 -
Alju05g1158 622 Pfam Bacteroidetes VLRF1 release factor 295 335 IPR041175 -
Alju05g1158 622 MobiDBLite consensus disorder prediction 492 548 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1158 17 569 C2H2 Transcription Factor Family AT1G01930 43.021 8.81e-124 376