Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1151 ATGGCCTCAAATGTTCACAGAAATGGCGTCCCAAGGGGGACTGCGAAGCTCGATCGGCTTGTTTCGGCGGGCGCGAACCTTAAAGCGACGTCGTTTAAATCAAGGGTTCCTCCTTCATCGCAGTCTCCGGGATCCGCTCTTCGCCGGAGTAGCCCGGCCTCTTTGGCAGCTAGAAACGGAGACGGAGTACCTGGAAGAGTTCGAGTGGCTGTAAGACTTAGACCTCGAAATGCTGAAGAAATGGTGGCAGATGCTGATTTTGCTGATTGCGTGGAATTGCAACCTGAGTTTAAAAGGTTGAAACTTCGAAAAAACAATTGGGATTCAGACACATACGAGTTTGATGAAGTATTTACTGAATTTGCATCACAGAAGCGTGTCTATGAAGTTGTTGCTAAGCCAGTTGTGGAGAGTGTTCTTGATGGATATAATGGGACGGTAATGGCTTATGGCCAAACAGGCACTGGGAAAACTTTTACTGTTGGACAATTGGGGGAAGAAGACTCGTCCAATCGCGGCATCATGGTTCGTTCCATGGAGGATATTTTAGCAGATCTATCTCCAGAAACTGATTCAGTCACTGTCTCATACTTGCAGCTTTACATGGAGACTCTCCAGGACTTGCTTAATCCTGCGAATGATAACATTCCCATTGTGGAAGATCCAAGAACTGGTGATGTATCTTTGCCCGGGGCTACACTTGTTGAAATTAGAGACCAGCAGAGTTTTTTGGAGCTTCTAAGAGTGGGGGAAGCTCACCGTTTTGCTGCTAACACAAAGTTGAATACCGAATCTTCTCGGAGTCATGCTATTCTGATGGTACAAGTTAAGAGGTCGGTCTTAGAAAGTGAAGATATTTCTTCTAATGAAAACAATGACTCTTCGCATTTGACTAAACCTTCTAAACCACTTGTTCGAAAGAGCAAGCTGGTTTTGGTAGATTTGGCAGGTTCAGAGCGTATCCATAAGTCAGGGAGTGAAGGACAAATGCTAGAGGAAGCTAAATCTATAAATCTTTCACTTAGTGCAATGGGTAAATGTATTAATGCTCTAGCAGAAAACAGTGCGCATGTTCCAATTCGGGATTCCAAGCTCACCAGGTTGCTCAGAGATTCTTTTGGAGGTACTGCTAGAACTTCTTTGATTGTAACTATTGGACCATCTCCACGTCATCGGGGAGAGACTGCAAGTACCATACTGTTTGGCCAGAGGGCAATGAAAGTTGAGAATATGTTGAAAATAAAGGAGGAATTTGATTATAAAAGCTTAGCCCGGAGGTTTGAAGTACAAGTAGATAAGTTGATTGCGGAAAATGAAAGGCAGCAGAAAGCTTTTGAGACTGAAGTTGAAAAAATAAATTTGGAGGCTCAAAGTCGTGTAGCTGAAGTTGAGAGGAATTTTGCAGAAGCATTAGAGAAAGAGAGGTTGAAATGTCAGTTGGAGTACATGGATTCAGTCAAGCAGTTGGAGCATAAGTTGGTATTGAGTCAAGAACGACATGACTGCAATGGCTTTGCGGATGTTCACGGAGAGGGGCCTGGGCCATCTTCTGCAAATGAAGTAGCTGAGGTCAAAAGGATGCTTGAAAATGAAACGAATCGGAGAAAGGAAGCTGAAGAAGAGGTAGAAATTCTAAAAATTCAGCTGGGGAATCATTCACATACAGAGGCTGGAGGCGATATGGAGATTCTAAATCTTCGCAGAAAGCTGGAAGAGGAGGCTCATCAGAAAAAGAAACTTGAAGAAGAGATAATAATACTACGAAGTCAGTTATTACAATTGACCTATGAAGCTGATCAGATGAGGAGGTGTTTGGAAAGTGGTGGCTCTGTAAATGAGTTTTCTGCCGTGGATTCTGCCATGTCTCATGCTAGGAGTTCTCAACTCAGAGACAATGGGAATGGTCAGAAGGCATCTGTTGCTACACTTTTTGAACAAGTTGGATTGCAAAAGATATTGACATTACTGGAGTCAGATGATGCCAATGTACGGATTCATGCAGTGAAAGTGGTTGCTAACCTGGCAGCTGAAGAAGCAAATCAAAAGAGAATTGTAGAGGCAGGTGGGCTTACATCCTTACTTATGCTTCTTAGAAGATACGAGGATGAAACTGTTCGCAGGGTAGCAGCAGGGGCAATAGCCAATCTTGCGATGAATGAAGCCAATCAAGAACTTATTATGGCTGAAGGCGGAATTACTCTCTTATCAATGACTGCATCTGATGCTGAAGATCCACAAACTCTTCGAATGGTCGCCGGGGCTATTGCTAATCTATGTGGAAATGAGAAGTTATTAATGAAGCTAAGATCTCAAGGTGGTATAAAGGCTTTACTGGGAATCGTTAGGTGTGGACATCCTGATGTTCTTTCCCAAGTTGCTCGAGGAATTGCCAATTTTGCAAAATGCGAGTCCCGAGCTTCTAGTCAAGGGTTAAAAAGTGGCAGATCCTTTTTAGTGGAAGATGGTGCGCTTCCATGGATAGTGCAAAATGCTAATAACGAAGCTGCACCAATCAGGCGCCACATTGAGCTTGCAATTTGCCACTTGGCACAACATGAAGTGAATGCAAAAGACATGATAAATGGAGGTGCCCTTTGGGAGCTTGTCCGGATTTCAAGGGATTGTTCACGAGAGGACATACGAAATCTTGCCCGTCGAACACTAAATAATAGCCAAACATTTAAATCTGATCTGAGACGACTACGAATCGAGTACTGA 2718 0.4352 MASNVHRNGVPRGTAKLDRLVSAGANLKATSFKSRVPPSSQSPGSALRRSSPASLAARNGDGVPGRVRVAVRLRPRNAEEMVADADFADCVELQPEFKRLKLRKNNWDSDTYEFDEVFTEFASQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTVGQLGEEDSSNRGIMVRSMEDILADLSPETDSVTVSYLQLYMETLQDLLNPANDNIPIVEDPRTGDVSLPGATLVEIRDQQSFLELLRVGEAHRFAANTKLNTESSRSHAILMVQVKRSVLESEDISSNENNDSSHLTKPSKPLVRKSKLVLVDLAGSERIHKSGSEGQMLEEAKSINLSLSAMGKCINALAENSAHVPIRDSKLTRLLRDSFGGTARTSLIVTIGPSPRHRGETASTILFGQRAMKVENMLKIKEEFDYKSLARRFEVQVDKLIAENERQQKAFETEVEKINLEAQSRVAEVERNFAEALEKERLKCQLEYMDSVKQLEHKLVLSQERHDCNGFADVHGEGPGPSSANEVAEVKRMLENETNRRKEAEEEVEILKIQLGNHSHTEAGGDMEILNLRRKLEEEAHQKKKLEEEIIILRSQLLQLTYEADQMRRCLESGGSVNEFSAVDSAMSHARSSQLRDNGNGQKASVATLFEQVGLQKILTLLESDDANVRIHAVKVVANLAAEEANQKRIVEAGGLTSLLMLLRRYEDETVRRVAAGAIANLAMNEANQELIMAEGGITLLSMTASDAEDPQTLRMVAGAIANLCGNEKLLMKLRSQGGIKALLGIVRCGHPDVLSQVARGIANFAKCESRASSQGLKSGRSFLVEDGALPWIVQNANNEAAPIRRHIELAICHLAQHEVNAKDMINGGALWELVRISRDCSREDIRNLARRTLNNSQTFKSDLRRLRIEY 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1151 905 CDD KISc 66 406 - -
Alju05g1151 905 SMART arm_5 677 718 IPR000225 GO:0005515
Alju05g1151 905 SMART arm_5 719 760 IPR000225 GO:0005515
Alju05g1151 905 SMART arm_5 637 676 IPR000225 GO:0005515
Alju05g1151 905 SMART arm_5 761 801 IPR000225 GO:0005515
Alju05g1151 905 MobiDBLite consensus disorder prediction 31 61 - -
Alju05g1151 905 Coils Coil 563 597 - -
Alju05g1151 905 ProSiteProfiles Kinesin motor domain profile. 66 408 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju05g1151 905 FunFam Kinesin-like protein 617 893 - -
Alju05g1151 905 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 445 IPR027417 -
Alju05g1151 905 Coils Coil 521 555 - -
Alju05g1151 905 PRINTS Kinesin heavy chain signature 358 379 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju05g1151 905 PRINTS Kinesin heavy chain signature 142 163 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju05g1151 905 PRINTS Kinesin heavy chain signature 309 327 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju05g1151 905 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 688 731 IPR000225 GO:0005515
Alju05g1151 905 Gene3D - 508 895 IPR011989 -
Alju05g1151 905 Coils Coil 424 473 - -
Alju05g1151 905 PANTHER CENTROMERE PROTEIN E 66 614 IPR027640 GO:0003777|GO:0007018
Alju05g1151 905 FunFam Kinesin-like protein 58 438 - -
Alju05g1151 905 ProSitePatterns Kinesin motor domain signature. 308 319 IPR019821 GO:0003777|GO:0005524|GO:0007018
Alju05g1151 905 Pfam Kinesin motor domain 72 408 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju05g1151 905 SMART kinesin_4 64 416 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju05g1151 905 MobiDBLite consensus disorder prediction 31 49 - -
Alju05g1151 905 Pfam Armadillo/beta-catenin-like repeat 680 717 IPR000225 GO:0005515
Alju05g1151 905 Gene3D Kinesin motor domain 61 438 IPR036961 -
Alju05g1151 905 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 647 689 IPR000225 GO:0005515
Alju05g1151 905 SUPERFAMILY ARM repeat 637 890 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1151 Alju-ChrAlju05 35879821 35895472 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1151 61 410 Calmodulin-binding Proteins AT5G65930 34.877 8.82e-47 180