Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1122 ATGTCGTCCTCTCTGCTTCTTCTCTACCTTCCTCTTCTACTCTCCCTCTTCCCCATTATTCTGGCTTCTCCCTCTGAGCTTGACACTCTCATGGCTATCAAATACTCTCTTGACCCACAGAACCGTTTTCTGACCTCATGGACTCCATATTCTGACCCCTGTACCGGCGCTTTCGACGGCGTAGCATGCAACGAGCAAGGCCGCGTCGCCAATATCTCTCTCCAAGGAAAGGGTCTCTCCGGCAGCCTTCCGGCGGCCGTCGGTGACCTCAAGAGCTTGACCGGTCTCTATCTCCACTTCAATGCTCTCACTGGTACGATACCCAAGGAGATTGCAAATTTGAGTGACCTAACTGATTTGTACCTCAATGTCAATAATCTCTTCGGCGATATCCCTCGTGAGATTGGAAATATGTCTAATCTTCAAGTTTTGCAGCTTTGTTATAACAAAATTACAGGGAGTATTCCAACAGAATTGGGAAAATTGGAGAGACTTAGTGTTCTTGCTCTGCAATATAATGAGTTGAGTGGTGCAATTCCTGCTAGTTTGGGTCAGTTGCAGTCATTAACGAGGCTGGATCTGAGCTTTAATAACCTTTTTGGTCCTATTCCAGTGAGACTAGCAGATGCTCCCAAACTAGAAAGCCTGAATATTCAGAACAATTCTCTCTCAGGCAATGTCCCTGCAGCTCTTAGAAGACTGAGAAGCGGTTTCTGGTACATCAACAACCCTGGCTTATGTGGGTCTGAATTTACCAATTTAGTTGCTTGTAAATCTTTATTTGACCCTAGTAAGCCTGAACCATTTGAACCTGATAACTTTTCCACAAAGGGTCTTCCGGCATCAGTTGAACCAAAGGATGAAAAGTGCAGTGATGAAACCCACTGTAAAAAGTCAAAGCAATATTCAAGAATGGCTTTGGTTTTTGGAGTGATCGGAATTATTGCCGCTTCCACAGTTTCTGGACTTTCTATGTTTGTGTGGTTCCATCGTCAAAAACAGAAGATTGGGAGCACTAATAATGCTTCTGATAGCCATGTTAGCCAGAAAAATGCGGCTCCTTTGATCAGTTTAGAATATTCTAATGGATGGGATCCATTAGCCAAAGGTAAAAATACTTATTCCCAGGAAATTCTAGAGAGCTTTATGTTCAATCTAGAGGAGGTTGAACGTGCTACTCAATGCTTCTCCGAGGCGCATTTGTTGGGGAAGAGTAACTTGTCAGGAATTTACAGGGGAATTTTGAGAGATGGTTCAGTTGTGGTTGTAAAATGCATCAACATGACAAGCTGCAAGTCTGATGAAACTGAGTTCTTGAAGGGGTTGAAGATATTGACCTCATTAAAACATGAAAATCTCGTTCGCTTGAGAGGTTTTTGCTGTTCTAAAGGCAGGGGAGAGTGCTTTCTTGTTTATGATTTTGCCCCAAATGGGAATTTGTCTCAGTATTTGGATCTCAAGAAAGGTGATACTAAGATTCTAGAATGGTCTGCCAGAGTATCCATCATCCATGGTATTGCTAGAGGTATTGGTTATCTGCATGGAAAGAAGGGAAGAAAACAGGCTCTAGTTCTCCAGAATATATCAGCTGAAAATGTGCTTCTTGATGCACATCACAATTCATTACTTGCAGATTCAGGATTGCACAAACTCCTTGCTGATGATGTTGTCTTCTCCGCCCTTAAAGCTTCTGCTGCCATGGGATACCTTGCTCCAGAATACGCCACCACTGGTTGCCTAACCGAAAAGAGTGACATATATGCGTTTGGGGTGATAGTTTTCCAGCTTCTAACGGGAAAGAGCAATATTACTCAGTTATATCATTACCAGGCACAAGCATATGGTTTTAATGACATTGTTGATGTAAACCTTGAAGGGAGATTTTCAGAATCTGAGGCAGCTAAACTAGGGAGCATTGCTCTACTTTGCACTCATGAATCACCCCATGAACGACCATCTATGGGCCATGTAATGCAAGAACTGTCTGAGAAGTAG 1995 0.4301 MSSSLLLLYLPLLLSLFPIILASPSELDTLMAIKYSLDPQNRFLTSWTPYSDPCTGAFDGVACNEQGRVANISLQGKGLSGSLPAAVGDLKSLTGLYLHFNALTGTIPKEIANLSDLTDLYLNVNNLFGDIPREIGNMSNLQVLQLCYNKITGSIPTELGKLERLSVLALQYNELSGAIPASLGQLQSLTRLDLSFNNLFGPIPVRLADAPKLESLNIQNNSLSGNVPAALRRLRSGFWYINNPGLCGSEFTNLVACKSLFDPSKPEPFEPDNFSTKGLPASVEPKDEKCSDETHCKKSKQYSRMALVFGVIGIIAASTVSGLSMFVWFHRQKQKIGSTNNASDSHVSQKNAAPLISLEYSNGWDPLAKGKNTYSQEILESFMFNLEEVERATQCFSEAHLLGKSNLSGIYRGILRDGSVVVVKCINMTSCKSDETEFLKGLKILTSLKHENLVRLRGFCCSKGRGECFLVYDFAPNGNLSQYLDLKKGDTKILEWSARVSIIHGIARGIGYLHGKKGRKQALVLQNISAENVLLDAHHNSLLADSGLHKLLADDVVFSALKASAAMGYLAPEYATTGCLTEKSDIYAFGVIVFQLLTGKSNITQLYHYQAQAYGFNDIVDVNLEGRFSESEAAKLGSIALLCTHESPHERPSMGHVMQELSEK 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1122 664 CDD STKc_IRAK 402 663 - -
Alju05g1122 664 FunFam Leucine-rich repeat receptor-like kinase 25 134 - -
Alju05g1122 664 SUPERFAMILY L domain-like 24 236 - -
Alju05g1122 664 Gene3D Ribonuclease Inhibitor 21 255 IPR032675 -
Alju05g1122 664 Pfam Protein tyrosine and serine/threonine kinase 400 661 IPR001245 GO:0004672|GO:0006468
Alju05g1122 664 ProSiteProfiles Protein kinase domain profile. 396 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1122 664 MobiDBLite consensus disorder prediction 271 292 - -
Alju05g1122 664 SUPERFAMILY Protein kinase-like (PK-like) 374 660 IPR011009 -
Alju05g1122 664 Gene3D Transferase(Phosphotransferase) domain 1 476 664 - -
Alju05g1122 664 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 73 663 - -
Alju05g1122 664 Gene3D Phosphorylase Kinase; domain 1 367 474 - -
Alju05g1122 664 FunFam Protein NSP-INTERACTING KINASE 2 136 258 - -
Alju05g1122 664 Pfam Leucine rich repeat 139 199 IPR001611 GO:0005515
Alju05g1122 664 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Alju05g1122 664 FunFam Protein NSP-INTERACTING KINASE 2 368 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1122 Alju-ChrAlju05 34742069 34746027 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1122 13 509 Miscellaneous Gene Families AT4G22730 50.000 1.19e-175 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Alju05g1122 PK_Tyr_Ser-Thr 7.3e-35 CL0016