Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1119 ATGTTGACCTCCAAATGCAAATTAAATAATGAGCAACCACCCGCAAGAGCATTATCAACACTCATATTTGTTATTAACTTGGTACTCTTGCCAATAATCTCTTATTTCAATTTCATATTTTTTTTTGTGGTTCTGTTCTGTGCTTGCCTCTTTTCCGTTGTTATGGCAACTGATCATTCATCTTCCTTGGATAGAAAGGTGCCTGTACTTGCCCTTATTTCCTTCGTAGGTGGATTCGTAATTACAAGCGTACTTATTATATTTGCAGCTATTATTCGATATAGCAATATATTGAGGCACGTTTTGATTAGGAAAATAGAACGAAGAAAAACGCAGGGGAAAATAAAGCATGGAGATTTCTCTTCAACAATATGGAATTTTGATGGTCATATTGCATTTGAAGATATCATTAAAGCAACTAACGATTTTGACATCAAATACTACATAGGAGGAGGTGCTTGTGGTGAGGTTTACAAGGCAAAACTTCCCGGTGGTAAAATTGTTGCAGTGAAGAAACTTCGCCACATGCTGTCTGAAAATCCGTCGTCGGCATTTCATAAAAGTTTCTATAATGAGATCGAGATTTTGACGGAGATTCGTCATCGAAACATCGTTAAGCTCCATGGATATTGCTTAAATATACAGTACATGTTTCTGGTTTATGCATTTATGGAAAGTGGTAGCCTCTTACACGTATTAAGAAATGATGAGAAGGCTCAAGAGTTAACTTGGAGTAAGAGATTCAATATTATTAATGGGATAGCTCATGCTGTGAAATATATGCATCATGATTGTGTCCCACCAATTGTTCATAGAGACATCACAAGTAGTAATATCTTGTTGAACTCAGATATGGAAGCATTTGTCTCAGACTTTGGCACAGCTAGGCTCCTTGATCCATATTCATCAAATCGAAGTCTTTTGGTTGGCACTTATGGCTATGTTGCGCCTGAATTAGCATATACATTAGCAGTGACAGAAAAGTGTGATGTATATAGCTTTGGAGTAGTTGCATTAGAAACTATGATGGGAAAGCACTCGGGAGAGTTAATTTCATGTTTAACAAAGGATTATTCTAGAGATCAAAAGATAAAGCTAACAGATATCTTGGACGCAAGACTCCCTCAGCCTCAAACTCGGAAGGATATTTGGGATGTAATTCTTGTGATGACCATTGCGTTAGCATGCGTTTGTGCTGAACCAGATTGTAGGCCCTCAATGAAGCAAGTGACTCAGAAACTTTCACTTTCTAGGCCATTTTTTACACTCCCACTGTTCAATGATATTTCAATTGATCAGTTGATGAGTCAAGACATATATAATTTCATGCAAGCAAAATCTAGCTAG 1347 0.3712 MLTSKCKLNNEQPPARALSTLIFVINLVLLPIISYFNFIFFFVVLFCACLFSVVMATDHSSSLDRKVPVLALISFVGGFVITSVLIIFAAIIRYSNILRHVLIRKIERRKTQGKIKHGDFSSTIWNFDGHIAFEDIIKATNDFDIKYYIGGGACGEVYKAKLPGGKIVAVKKLRHMLSENPSSAFHKSFYNEIEILTEIRHRNIVKLHGYCLNIQYMFLVYAFMESGSLLHVLRNDEKAQELTWSKRFNIINGIAHAVKYMHHDCVPPIVHRDITSSNILLNSDMEAFVSDFGTARLLDPYSSNRSLLVGTYGYVAPELAYTLAVTEKCDVYSFGVVALETMMGKHSGELISCLTKDYSRDQKIKLTDILDARLPQPQTRKDIWDVILVMTIALACVCAEPDCRPSMKQVTQKLSLSRPFFTLPLFNDISIDQLMSQDIYNFMQAKSS 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1119 448 PANTHER LEUCINE RICH REPEAT KINASE 2 53 416 - -
Alju05g1119 448 ProSiteProfiles Protein kinase domain profile. 143 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1119 448 FunFam Leucine-rich repeat receptor protein kinase MSP1 106 223 - -
Alju05g1119 448 Gene3D Phosphorylase Kinase; domain 1 103 223 - -
Alju05g1119 448 Gene3D Transferase(Phosphotransferase) domain 1 224 419 - -
Alju05g1119 448 FunFam MDIS1-interacting receptor like kinase 2 224 419 - -
Alju05g1119 448 Pfam Protein tyrosine and serine/threonine kinase 147 414 IPR001245 GO:0004672|GO:0006468
Alju05g1119 448 ProSitePatterns Tyrosine protein kinases specific active-site signature. 269 281 IPR008266 GO:0004672|GO:0006468
Alju05g1119 448 SUPERFAMILY Protein kinase-like (PK-like) 126 414 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1119 Alju-ChrAlju05 34077061 34078737 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1119 55 317 Receptor kinase-like Gene Family AT4G08850 47.426 8.43e-69 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Alju05g1119 PK_Tyr_Ser-Thr 2.4e-42 CL0016