Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1112 ATGGATGTGGTTCTTCGTTCATTAAGTACGTTTATTCTTCTACTTCTTCTTCCCTTTCTGCTTTCCTCTTATCGTGCCTATGGCAACACATTGAACGAAGTCAAATCATGGTGTAGCCAAACCCCTAACCCTAAACCGTGTGAGTACTTCTTGGGCTCCAAAACTTACAACAAACCCATAAAGCAAAAGTCAGATTTCTTCAAGGTTTCAGTTGACCTTGCTCTTGATAGAGCTCAAGTGGGTCTAAATAAGACTCTCTCTCTTGGCCCTAAGTGTAGAAACGCACGTGAGAAAGCTGCTTGGGCAGATTGCCTTGAGCTCTATGAGCTACTCATAAGCAGGCTCTCAAAAACTGTTAACGACAAATGCACCAAAGTTGATGCTCAGACTTGGCTCAGCACGGCTCTGACCAACCTCGAAACTTGCATGTTCGGGTTTTACGACCTCGGAGTTACAGACTATGTGCTGCCATTGATGTCTAACAACGTTACTCAGTTGCTAAGCAATGCCTTGTCTCTTAACAAGGCCCCATCATCAAACGCTGCTATGTCGAGTTCAATCAAAGGTGGCTTCCCGGCCTGGGTTAAGCCCGGTGACCGGAAACTGTTGCAGGCTTCTTCGCCGGCTTCTCAGGCGAATGTCGTGGTGGCTAAAGACGGTTCGGGGAAGTACAAGACCTTGAAGGAGGCGGTAGATGCTGCGCCGAAGAGTAACACGGGAAGGTAG 726 0.4752 MDVVLRSLSTFILLLLLPFLLSSYRAYGNTLNEVKSWCSQTPNPKPCEYFLGSKTYNKPIKQKSDFFKVSVDLALDRAQVGLNKTLSLGPKCRNAREKAAWADCLELYELLISRLSKTVNDKCTKVDAQTWLSTALTNLETCMFGFYDLGVTDYVLPLMSNNVTQLLSNALSLNKAPSSNAAMSSSIKGGFPAWVKPGDRKLLQASSPASQANVVVAKDGSGKYKTLKEAVDAAPKSNTGR 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1112 241 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 176 IPR035513 -
Alju05g1112 241 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 176 IPR035513 -
Alju05g1112 241 CDD PMEI-like_3 36 179 - -
Alju05g1112 241 Gene3D - 208 241 IPR012334 -
Alju05g1112 241 NCBIfam pectinesterase inhibitor domain 9 175 IPR006501 GO:0004857
Alju05g1112 241 SMART PMEI_2 29 173 IPR006501 GO:0004857
Alju05g1112 241 SUPERFAMILY Pectin lyase-like 207 239 IPR011050 -
Alju05g1112 241 Pfam Plant invertase/pectin methylesterase inhibitor 33 173 IPR006501 GO:0004857
Alju05g1112 241 PANTHER PECTINESTERASE 15 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1112 Alju-ChrAlju05 33864311 33865140 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1112 5 241 Carbohydrate Esterase AT2G45220 54.812 3.11e-87 266