Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1104 ATGGATTCACTGTTCACCGCAGATTCCATTGCTGTCCTCCTCCTCCGCCCTCTCCTTCCCATCAGATTTGTTCTCTTCGTAATTTCTCTGGGCTGGTTGTTAGCATGGAAACTAGTCCTGGTACACGTTCCTTTGGTGCAAGAGATTTTCGGTCTTAGAAAAAAACCCATCAAATCTAAACCCCCAACTCCTCTTCTATCTAAATTTTATAATACCATTAATGCACAAAAGTCTCAATAAGTTTATTTTATAACTTTCCTGTTTCAATTTTTTTATGTACCTGTGTTTGTTCATGTTTTGCGTGATATACATAAAGATGAGACAGTGGAATACGTTCTAGCCTTAATAGATGAAATGCTTACAGCAAATCCAAAAAGAGCGAGGCTATTTCATGATAAGTTCCTTACAGATGAGGACGCCTCTGAACCTTTCTCAAGTTAA 441 0.3832 MDSLFTADSIAVLLLRPLLPIRFVLFVISLGWLLAWKLVLVHVPLVQEIFGLRKKPIKSKPPTPLLSKFYNTINAQKSQXVYFITFLFQFFYVPVFVHVLRDIHKDETVEYVLALIDEMLTANPKRARLFHDKFLTDEDASEPFSS 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1104 146 Pfam V-ATPase subunit H 92 137 IPR004908 GO:0000221|GO:0046961|GO:1902600
Alju05g1104 146 SUPERFAMILY ARM repeat 84 144 IPR016024 -
Alju05g1104 146 Gene3D - 59 146 IPR011989 -
Alju05g1104 146 PANTHER TRANSMEMBRANE PROTEIN 5 79 - -
Alju05g1104 146 Pfam Domain of unknown function (DUF4750) 8 58 IPR031851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1104 Alju-ChrAlju05 33455211 33455991 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1104 92 144 Primary Pumps ATPases(2) AT3G42050 71.698 1.07e-18 79.3