Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1074 ATGAAAGGGGAAGTGCAACTTGAGCCGCCAGTTGCGCAAAACCTTGGGGATTGCGACCCTCTACTCGATAATCAGGAGGAGGAGGAAGAAGAGCGGAAGGAGGTGGAGTGCCCAGGAAGCACGAGTGAGATTAAGAGTGAAGATGTCGAGGCTGGCTTACTTCCTTCTTGTCGAATTTGCCTGGAGAGCGATTCCGAGCCAGGTGATGAATTGATATCACCGTGCATGTGCAAGGGCACCCAACAGTTTGTCCATCGTTCATGTCTTGACCATTGGCGCTCCGTAAAGGAAGGGTTTGCCTTCTCACACTGCACCACTTGCAAAGCCCAATTTCATCTACGAATTGAATTGTTTGAGGACAACTCCTGGCGCAAAATAAAGTTCAGGCTTTTTGTGGCGAGGGATGTTTTCCTTGTATTTTTAGCTGTACAGACTGTGATTGCGGCAATGGGTGCCTTTGCATACCTCATGGACAAAGATGGGGCTTTCAGGAACTCTTTCGATGATGGCTGGGATCGGATACTGTCTAACCATCCTATACCATTTTATTATACTATTGGAGTACTAGCCTTCTTTGTGCTGCTTGGATTTTTTGGTCTCATTCTACATTGTTCCTCCCTCAATGCCAATGACTCCGGAATGGCTGGGTGTCAGAACTGTTGTTATGGATGGGGCATTTTGGATTGCTTTCCTGCATCAATGGAGGCATGCTTTGCCCTTGTGGTTGTCTTCGTTGTCATCTTTGCAATTTTGGGTATAGCTTATAGTTTCCTCGCAGCCACCATGGCGATTCAAAGAATTTGGCAGAGACACTACCACATACTGACCAAGAGGGAGCTAACTAAGGAATATGTTGTGGAGGATCTCCAAGGTTCATATTTCCCCCCAAAGTTGGACCCGGAACATGAAGAGCGCTTGAAAATGCTCAAGCTTTTGTGA 939 0.4696 MKGEVQLEPPVAQNLGDCDPLLDNQEEEEEERKEVECPGSTSEIKSEDVEAGLLPSCRICLESDSEPGDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRIELFEDNSWRKIKFRLFVARDVFLVFLAVQTVIAAMGAFAYLMDKDGAFRNSFDDGWDRILSNHPIPFYYTIGVLAFFVLLGFFGLILHCSSLNANDSGMAGCQNCCYGWGILDCFPASMEACFALVVVFVVIFAILGIAYSFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLQGSYFPPKLDPEHEERLKMLKLL 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1074 312 MobiDBLite consensus disorder prediction 1 42 - -
Alju05g1074 312 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 39 121 IPR013083 -
Alju05g1074 312 Pfam RING-variant domain 57 107 IPR011016 GO:0008270
Alju05g1074 312 ProSiteProfiles Zinc finger RING-CH-type profile. 49 114 IPR011016 GO:0008270
Alju05g1074 312 SMART ringv_2 56 108 IPR011016 GO:0008270
Alju05g1074 312 CDD RING_CH-C4HC3_MARCH 57 108 - -
Alju05g1074 312 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 16 312 - -
Alju05g1074 312 SUPERFAMILY RING/U-box 55 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1074 Alju-ChrAlju05 28022829 28025420 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1074 1 312 C3H Transcription Factor Family AT1G11020 76.562 1.12e-166 464