Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1062 ATGTGGATGGGCATGGATGCAGTGAGTTTATTTGGTCAGAATTCTTGGTGGGTGGGTCTATTGTTGGAATCTTTTGACTCTGAAGAGATGGTCTGGGACATTGATATTATCTCGACCATAATAAGGGAAGTTCATATAGATCAAGTGGCCTATCAGCAACAAGCCTTGACAAGTAGAATATGGGATGCTGTAGAATTAATGAAAGCTGGATTAAGATGCTCTCAGCATCCTATGATGGAATTTAAGAATGAGCAAAGTGAAGGAAAGCTTAAAAAAGTGATTGTTAGGTTAGGAGGCAGGGTTCTTAGCCAAATTCATGCTTTCCTTTTCGTTGGGCATTCTCAATACAGAGGTGGCGGCGGCAGGGGCAGCAGGCCGTTTAGACGGGGAGGTCGTGGCCGTTTCAGTCACCGAGGCCGTGTGCCTTACCATGGTGGGGGACGTGGTCATGGGGGTGGTAGGCATTTTCCATCCCATTCTTTAGAATTTGTACCTGCTGCAGTTGGAGACACATCACTGGCACCACCTTCATCATCAGTATCTAGGCCTCATGTTCCAGCTGCAACATTGCAGCCTCCACCATGTGATTTATGGTGTGAAGTTTGCAAGGTTGAGTGTAATACTGCTGAGATTATGGAGCAACATAAGAATGGAAAGCGGCATAAAAAGAATTTGCAGGTACATGAGGAATTACAGAGGCGCAAAGCTATAAATGGGCAACAGAGTAGCCAGATACCCTCTTCTCAATTGAATGTAACAACTCAGGGTGAGAAAGCTCTTGAATTGAAGACAGAAGGGTGTCCAGAAGAAAATATGATCTCTGAAGCGGTAGAAGACAATCCTAAGAATGAACTTGATTTGCAGAACAATACAGGAAAAACTTCTGAAGTTCCAGCTGAAGAGGAAAAACCCAAGGATGATTTGGTTTCAAGGGGTCGTGGTTTGAAGCGAAAGATGAGAGGAGGCAGAGGTGGTAGATACATGAGAAATAATGATGGGTCAAGAAAGCCAGTGGAACCTCCAAAGCCTAAACAGGCTTTATCTTTCATATGTGAGTTGTGTAATGTTATATGTGAGTCACAAGTTGTTTATGACAGTCATCTGGCTGGTAAAAAGCACCGATCTAATCTTAAACGTGTCCATGGGCACCAAGCCGTGCCCCAAGAACCAGGGCCTCAAGCACTTCCCCCAATTAACACCAGTGCTTTGTCTAATTCCATTGACATCAATGCTCTTGCAAATTCAATAAACACTCAAGTCCGACAAGGTGTTAATGATCCACAAGTCCTCTTGGCTCAGCTTGTAATGACAGTACTGTCTCAAGCTCAAGCATCAACAGCAGCAGCACCCATAGGATCTGTAGCTGCGCAACCTTCAGCACTCATGCCATCAGCTGGCTCAAGTTATCGGCCACCATTTCAAAATGTCCCGCCGACACAAGTGTCCGAAAATGCTGCACATGATGGGAATGAAAGTCCAACAGTGAAAGCAAAAGATCAGGTGCAAACTGACCCACCACAGGCTGATGCTCCTCAAACTGCGGGTGGAAGCTCAGATACTGAAAACAAGGTGCATAAAGCGCCCGCAGAAAATCCGAGTCCAGCAAATGAGCAAAGACCTTCAGAAGGCAATGCTCCTACTTCGTAG 1647 0.4536 MWMGMDAVSLFGQNSWWVGLLLESFDSEEMVWDIDIISTIIREVHIDQVAYQQQALTSRIWDAVELMKAGLRCSQHPMMEFKNEQSEGKLKKVIVRLGGRVLSQIHAFLFVGHSQYRGGGGRGSRPFRRGGRGRFSHRGRVPYHGGGRGHGGGRHFPSHSLEFVPAAVGDTSLAPPSSSVSRPHVPAATLQPPPCDLWCEVCKVECNTAEIMEQHKNGKRHKKNLQVHEELQRRKAINGQQSSQIPSSQLNVTTQGEKALELKTEGCPEENMISEAVEDNPKNELDLQNNTGKTSEVPAEEEKPKDDLVSRGRGLKRKMRGGRGGRYMRNNDGSRKPVEPPKPKQALSFICELCNVICESQVVYDSHLAGKKHRSNLKRVHGHQAVPQEPGPQALPPINTSALSNSIDINALANSINTQVRQGVNDPQVLLAQLVMTVLSQAQASTAAAPIGSVAAQPSALMPSAGSSYRPPFQNVPPTQVSENAAHDGNESPTVKAKDQVQTDPPQADAPQTAGGSSDTENKVHKAPAENPSPANEQRPSEGNAPTS 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1062 548 MobiDBLite consensus disorder prediction 127 144 - -
Alju05g1062 548 MobiDBLite consensus disorder prediction 296 314 - -
Alju05g1062 548 Pfam Zinc-finger of C2H2 type 349 373 - -
Alju05g1062 548 Pfam Zinc-finger of C2H2 type 198 221 - -
Alju05g1062 548 MobiDBLite consensus disorder prediction 461 520 - -
Alju05g1062 548 MobiDBLite consensus disorder prediction 275 342 - -
Alju05g1062 548 SUPERFAMILY beta-beta-alpha zinc fingers 190 228 IPR036236 -
Alju05g1062 548 Gene3D Classic Zinc Finger 332 379 - -
Alju05g1062 548 Gene3D Classic Zinc Finger 188 230 - -
Alju05g1062 548 MobiDBLite consensus disorder prediction 236 257 - -
Alju05g1062 548 MobiDBLite consensus disorder prediction 534 548 - -
Alju05g1062 548 MobiDBLite consensus disorder prediction 120 151 - -
Alju05g1062 548 SUPERFAMILY beta-beta-alpha zinc fingers 334 380 IPR036236 -
Alju05g1062 548 MobiDBLite consensus disorder prediction 234 257 - -
Alju05g1062 548 SMART ZnF_U1_5 196 228 IPR003604 GO:0003676|GO:0008270
Alju05g1062 548 SMART ZnF_U1_5 346 380 IPR003604 GO:0003676|GO:0008270
Alju05g1062 548 PANTHER OS06G0651300 PROTEIN-RELATED 102 389 - -
Alju05g1062 548 MobiDBLite consensus disorder prediction 461 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1062 Alju-ChrAlju05 26224403 26227081 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1062 178 377 C2H2 Transcription Factor Family AT5G61190 22.358 1.65e-06 49.3