Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1057 ATGTCGACTTTCCATCTCCAATGTCAGACGCAACATCTGCGACCTCTGCCTCTTCCGAATCCGTTGCTCTGTTCTAAACTGCGTGTTCCTCTCAATGCAACAACAACAACTTCTTTTTCCTTGAAACAGTATTCATCTCAAAATGGAGCAAAGGCAATGTTGACATTAGAACAACTTCCTCCTAATGCCCTTCGCCGCAAGAGAGACCCACAATGGAGAGGAGGTTTCAGCCTTGGACTCGACTTGGGATTGGCTCGCACGGGTCTTGCCCTCAGTAAAGGCTTCGCTGTTCGTCCATTGACGGTTTTGGAATTGCGAGGGCAGAAGCTTGAGGTCCAGCTTCTTAAGATTGCAGAACAGGAGGAAGCTGATGAGTTTATTGTTGGACTTCCTAAATCTTCTGATGGGAAGGAAACGCCACAATCAAACAAAGTTCGCAGCGTTGCTGGAAGGCTTGCAGTTCAAGCAGCAGAGAGGGGTTGGAGAGTGTATCTGCAGGATGAACATGGGACAACAACAGAAGCAATGGATCGAATGATTAACATGGGTCTCAGCAAGTCCTCTCAGCAAAGGAAACTTGATGCTTTTGCTGCCGTGATGGTACTGGAGAGATATTTCCACTTGTCAGGTGAGGGTGTTGAACTTGTATTGCCCAAGAATCTTGATCTGCAAGAGAAACTTCAAAGGGGTCCTCCTAAAGACATTGATTTCTTGGATGAATTTGATGAGGGCTGA 735 0.4667 MSTFHLQCQTQHLRPLPLPNPLLCSKLRVPLNATTTTSFSLKQYSSQNGAKAMLTLEQLPPNALRRKRDPQWRGGFSLGLDLGLARTGLALSKGFAVRPLTVLELRGQKLEVQLLKIAEQEEADEFIVGLPKSSDGKETPQSNKVRSVAGRLAVQAAERGWRVYLQDEHGTTTEAMDRMINMGLSKSSQQRKLDAFAAVMVLERYFHLSGEGVELVLPKNLDLQEKLQRGPPKDIDFLDEFDEG 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1057 244 Pfam Holliday junction resolvase 77 206 IPR005227 GO:0006364
Alju05g1057 244 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 53 226 IPR005227 GO:0006364
Alju05g1057 244 CDD YqgF 78 207 IPR005227 GO:0006364
Alju05g1057 244 NCBIfam Holliday junction resolvase RuvX 78 206 IPR005227 GO:0006364
Alju05g1057 244 Hamap Putative pre-16S rRNA nuclease [yqgF]. 75 210 IPR005227 GO:0006364
Alju05g1057 244 Gene3D - 77 212 IPR037027 GO:0006139
Alju05g1057 244 SMART rnase_8s 75 175 IPR006641 GO:0006139
Alju05g1057 244 FunFam Holliday junction resolvase 77 214 - -
Alju05g1057 244 SUPERFAMILY Ribonuclease H-like 76 207 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1057 Alju-ChrAlju05 26033572 26036689 Dispersed