Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1056 ATGGCTCCTTTCATTCTTGGAGGTTTCTTCTTGCTCTTCCTTATAATAATGAGTCTTTCTTTCTCATTGTTCAACCCTAGAATCTTTCTCAATTCTTTATACCCCACTGATTCAGAGTGGTCTTCAGCAGATGCTACATGGTATGGAAGCCCTATGGGAGCTGGAACTGACGGAGGTGCTTGTGGATATGGAAGTGATGTAGAAAAAACCCCGTTTTTTTCAATGATAGCAGCTGGAGGCCCACCAATTTATAACTCAGGAAATGGGTGCGGATCTTGTTATCAGGTGATGTGCACGTCTAATCCAGCATGCTCAGGTAGTGCAGTGAGCATAGTTATAACTGATGAATGTGTTGGGTGTGGCTCTACTCAAATATTTCACTTTGATTTGAGTGGCACAGCTTTTGGTGCTATGGCTATTTCTGGGCAAGCAGATCTGTTACGCAATGTTGGCAAGCTAGAGATTCAATATAAAAGAATTCAATGTAATTATGGAGGAAAACCAATTGCATTTAAAGTGGACGCAGGATCGAATCAATACTATTTCGCTGTGTTGATAGAATATGAGAATGGAGATGGTGATCTTTCAATTGTTGAACTAAAACAAGCTAACTCTGAACAATGGCGAGCCATGCAATTAAATTCAGGTGCAACATGGAAGCTTAACTCTGCCATACCACTTCAAGCCCCGTTCTCCATTAGGCTAACCACTTTCAAGTCAAAGAAAACACTTGAAGCCATCAACGTGATTCAAGCAGGGTGGAGTCCAGGCCAAATTTATCAATCTTCTGTGAACTTCTAA 801 0.412 MAPFILGGFFLLFLIIMSLSFSLFNPRIFLNSLYPTDSEWSSADATWYGSPMGAGTDGGACGYGSDVEKTPFFSMIAAGGPPIYNSGNGCGSCYQVMCTSNPACSGSAVSIVITDECVGCGSTQIFHFDLSGTAFGAMAISGQADLLRNVGKLEIQYKRIQCNYGGKPIAFKVDAGSNQYYFAVLIEYENGDGDLSIVELKQANSEQWRAMQLNSGATWKLNSAIPLQAPFSIRLTTFKSKKTLEAINVIQAGWSPGQIYQSSVNF 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1056 266 SUPERFAMILY PHL pollen allergen 167 262 IPR036749 -
Alju05g1056 266 SUPERFAMILY Barwin-like endoglucanases 30 166 IPR036908 -
Alju05g1056 266 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 180 262 IPR007117 -
Alju05g1056 266 Gene3D - 164 266 IPR036749 -
Alju05g1056 266 Gene3D - 30 163 IPR036908 -
Alju05g1056 266 CDD DPBB_EXPB_N 40 162 - -
Alju05g1056 266 PANTHER EXPANSIN-B3 21 266 - -
Alju05g1056 266 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 58 167 IPR007112 -
Alju05g1056 266 PRINTS Major pollen allergen Lol pI signature 171 186 IPR005795 GO:0005576|GO:0019953
Alju05g1056 266 PRINTS Major pollen allergen Lol pI signature 98 108 IPR005795 GO:0005576|GO:0019953
Alju05g1056 266 PRINTS Major pollen allergen Lol pI signature 139 154 IPR005795 GO:0005576|GO:0019953
Alju05g1056 266 PRINTS Major pollen allergen Lol pI signature 217 234 IPR005795 GO:0005576|GO:0019953
Alju05g1056 266 PRINTS Major pollen allergen Lol pI signature 78 89 IPR005795 GO:0005576|GO:0019953
Alju05g1056 266 PRINTS Major pollen allergen Lol pI signature 187 202 IPR005795 GO:0005576|GO:0019953
Alju05g1056 266 PRINTS Expansin/Lol pI family signature 248 262 IPR007118 GO:0005576
Alju05g1056 266 PRINTS Expansin/Lol pI family signature 208 222 IPR007118 GO:0005576
Alju05g1056 266 PRINTS Expansin/Lol pI family signature 39 54 IPR007118 GO:0005576
Alju05g1056 266 PRINTS Expansin/Lol pI family signature 57 75 IPR007118 GO:0005576
Alju05g1056 266 PRINTS Expansin/Lol pI family signature 150 166 IPR007118 GO:0005576
Alju05g1056 266 PRINTS Expansin/Lol pI family signature 80 98 IPR007118 GO:0005576
Alju05g1056 266 Pfam Lytic transglycolase 77 156 IPR009009 -
Alju05g1056 266 Pfam Expansin C-terminal domain 169 250 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1056 Alju-ChrAlju05 25597172 25599919 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1056 24 266 Expansin Gene Family AT1G65680 56.327 2.52e-98 287