Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1049 ATGGCACTTTTCACTCTTCAGCTTCCATTAACCTCTCAATTCTTCAATCCTCTTGTGGCTTTGTTTTCATTCTTGCTCATAGTGAGCGCTTCCTCTTGCTCCAATAACCCTAGAAAGTTTCTTAATTCTTCTTCATCCTACGCTTCTGATTCCGATTGGTCTCCTGCAGACGCTACATGGTACGGAAGCGCTATCGGGGATGGAAGTGAAGGTGGTGCTTGTGGATATGGCAGTACTGTAGGACAACCTCCATTTTCTTCGATGATATCAGCAGGCGGCTCACCTATATATAATTCAGGCAAAGGCTGTGGAAATTGCTATGAGGTGAAGTGCACGTCGAATCAAGCATGTTCTGGTAACCCAGTGACCGTTGTGATCACTGATGAGTGTCCTGGGTGTGGTTCTGCTCAGAGATTTCACTTTGATTTGAGTGGCACTGCTTTTGGAGCCATGGCTGTTTCTCGTCAAGCAGATCAACTACGCAATGCTGGCAAATTGGAGATTCAATATAGAAGTGTTAAATGTAACTTTCCAGGGACAACTATAGCATTCAAAGTGGACTCAGGATCAAACCCATATTATTTTTCCGTCATGATAGAATATGAGAATGGACATGGCCTTGCCAACGTTGAACTCAAGGAAGCTCAAGATTCAGCTTCATGGCGTCCCATGCAACAATCCTGGGGTGCAGTTTGGAAGCTTAACTCTGGCTCACCACTTCAGCCACCATTCTCCCTCCGGCTAACCGCACCAGAGTCCTCGGACTCTCAGAACACCGTGGAGGCAAGCAATGTGATCCCAGCCGGGTGGACTCCTGGTCAGACTTATCGATCTCTGGTCAACTTCTACTAA 852 0.466 MALFTLQLPLTSQFFNPLVALFSFLLIVSASSCSNNPRKFLNSSSSYASDSDWSPADATWYGSAIGDGSEGGACGYGSTVGQPPFSSMISAGGSPIYNSGKGCGNCYEVKCTSNQACSGNPVTVVITDECPGCGSAQRFHFDLSGTAFGAMAVSRQADQLRNAGKLEIQYRSVKCNFPGTTIAFKVDSGSNPYYFSVMIEYENGHGLANVELKEAQDSASWRPMQQSWGAVWKLNSGSPLQPPFSLRLTAPESSDSQNTVEASNVIPAGWTPGQTYRSLVNFY 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1049 283 SMART dpbb_1 89 170 IPR007112 -
Alju05g1049 283 Pfam Expansin C-terminal domain 182 267 IPR007117 -
Alju05g1049 283 Pfam Lytic transglycolase 90 170 IPR009009 -
Alju05g1049 283 PANTHER EXPANSIN-B3 26 282 - -
Alju05g1049 283 SUPERFAMILY Barwin-like endoglucanases 52 200 IPR036908 -
Alju05g1049 283 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 71 180 IPR007112 -
Alju05g1049 283 SUPERFAMILY PHL pollen allergen 181 278 IPR036749 -
Alju05g1049 283 CDD DPBB_EXPB_N 55 175 - -
Alju05g1049 283 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 193 278 IPR007117 -
Alju05g1049 283 Gene3D - 177 283 IPR036749 -
Alju05g1049 283 PRINTS Expansin/Lol pI family signature 52 67 IPR007118 GO:0005576
Alju05g1049 283 PRINTS Expansin/Lol pI family signature 93 111 IPR007118 GO:0005576
Alju05g1049 283 PRINTS Expansin/Lol pI family signature 163 179 IPR007118 GO:0005576
Alju05g1049 283 PRINTS Expansin/Lol pI family signature 221 235 IPR007118 GO:0005576
Alju05g1049 283 PRINTS Expansin/Lol pI family signature 70 88 IPR007118 GO:0005576
Alju05g1049 283 Gene3D - 37 176 IPR036908 -
Alju05g1049 283 PRINTS Major pollen allergen Lol pI signature 91 102 IPR005795 GO:0005576|GO:0019953
Alju05g1049 283 PRINTS Major pollen allergen Lol pI signature 152 167 IPR005795 GO:0005576|GO:0019953
Alju05g1049 283 PRINTS Major pollen allergen Lol pI signature 184 199 IPR005795 GO:0005576|GO:0019953
Alju05g1049 283 PRINTS Major pollen allergen Lol pI signature 111 121 IPR005795 GO:0005576|GO:0019953
Alju05g1049 283 PRINTS Major pollen allergen Lol pI signature 230 247 IPR005795 GO:0005576|GO:0019953
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1049 Alju-ChrAlju05 24891365 24894096 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1049 37 282 Expansin Gene Family AT1G65680 61.134 7.62e-105 304