Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1009 ATGCTCGTCACAACTGCGTTTTCCTCTGTCTCCGCCTTCCAGTTCGCCACCATAAGACCTTCCGAATCTGGTTCAAACAATTCTTTTCCTCTGAAGCTCAGAGCATCTCTCCACGACTATCCGCTCGCAAGCAAAATTGTGGTAAAAAATTTACCATATTCTACTGGTGAGAATATTCTCAAGAAGGAATTTTCAAACTTTGGCGAGATAGCTGAAGTTAAAGTTGTTAAAGATACCACAAAAAGATCCAAGGGATATGCCTTTATTCAGTACACTTGTCAAGATGATGCAATGCTTGCACTAGAAAACATGGATCAAAAGGTATTTGATGGGCGGAAAATATATGTAGAAGTTGCAAAACCTGGTAAGGATGCTTTTCGTGGCCACCCAAAGACCTCAGGGCCCCCAAAGAAGTGGCATAACCCAGTTCAAGAGGAAGTGGTGGATTGCTGGATGTTTTCATATGCCTTGACTTTTGTGCAAGCAAAAGTGATTGGTTCAGCCAAGCTTATCTGTCTTTCTGCTTACATATCAGATTAG 540 0.4185 MLVTTAFSSVSAFQFATIRPSESGSNNSFPLKLRASLHDYPLASKIVVKNLPYSTGENILKKEFSNFGEIAEVKVVKDTTKRSKGYAFIQYTCQDDAMLALENMDQKVFDGRKIYVEVAKPGKDAFRGHPKTSGPPKKWHNPVQEEVVDCWMFSYALTFVQAKVIGSAKLICLSAYISD 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1009 179 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 44 121 IPR000504 GO:0003723
Alju05g1009 179 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD 44 141 - -
Alju05g1009 179 SMART rrm1_1 45 117 IPR000504 GO:0003723
Alju05g1009 179 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 46 114 IPR000504 GO:0003723
Alju05g1009 179 CDD RRM_SF 46 117 - -
Alju05g1009 179 SUPERFAMILY RNA-binding domain, RBD 44 130 IPR035979 GO:0003676
Alju05g1009 179 Gene3D - 32 142 IPR012677 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1009 43 124 Eukaryotic Initiation Factors Gene Family AT4G34110 31.707 1.79e-08 51.2