Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0975 ATGGAAAGAGATGATAACTTCTCTACCACACTCTCCTCTTCATCTTCTTCTCCATTTTCATCATCAACGTCAACTTCAGCAACAGTTTCAGGTTTGAAATTCAAGCATGATCAGTATGAAAATGGTGATCTGAATGGTAAGCACCAGAAAAGTAAGAAGAAGAAGAGACAGAAAAGTGAGAGTGATGATGATGATAATAATACTGATGAAGGGAATAATAATAATAATGATAAGCATTCTACTTACAGAGGTGTGAGAATGAGAGTTTGGGGAAAATGGGTTTCTGAGATTCGTGAACCCAGAAAGAAGTCAAGAATTTGGCTCGGAACATATCCAACTGCGGAAATGGCGGCTCGAGCCCATGATGTAGCCGCTTTAGCCATCAAAGGTCAATCGGCTTTCCTCAATTTCCCAGAACTGGCTCACCGGCTTCCCCGTCCGGCCAGCTCAGCTCCAAAGGACATCCAGGCCGCGGCTTCAAAGGCGGCGGCAGCCACCACCACCGTGTTAGATGACGTCAAACACTGTCAAGCCGAGGCAGAAGCCAGAGGAGCCGAGCCGAACCAGGGAGAACTGGTCACTTCATCATCATCATCTTCTTCTTCAAGTTCTGTTCCTGAGGATGAAGACACATTGTTTGACCTACCAGATCTCTTCTCTGATGGGAACATTAATGGAGTCTGCTCATATTCTTCTTGGAATTTATGTGCAGTAGTTGATAGTGGTTTAAGCCTTGATGAGCCATTTTTATTATGGGAGGTATATTAA 768 0.4427 MERDDNFSTTLSSSSSSPFSSSTSTSATVSGLKFKHDQYENGDLNGKHQKSKKKKRQKSESDDDDNNTDEGNNNNNDKHSTYRGVRMRVWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGQSAFLNFPELAHRLPRPASSAPKDIQAAASKAAAATTTVLDDVKHCQAEAEARGAEPNQGELVTSSSSSSSSSSVPEDEDTLFDLPDLFSDGNINGVCSYSSWNLCAVVDSGLSLDEPFLLWEVY 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0975 255 MobiDBLite consensus disorder prediction 7 32 - -
Alju05g0975 255 FunFam Ethylene-responsive transcription factor 2 80 139 - -
Alju05g0975 255 SUPERFAMILY DNA-binding domain 80 139 IPR016177 GO:0003677
Alju05g0975 255 MobiDBLite consensus disorder prediction 189 208 - -
Alju05g0975 255 CDD AP2 80 140 IPR001471 GO:0003700|GO:0006355
Alju05g0975 255 ProSiteProfiles AP2/ERF domain profile. 81 138 IPR001471 GO:0003700|GO:0006355
Alju05g0975 255 Pfam AP2 domain 82 130 IPR001471 GO:0003700|GO:0006355
Alju05g0975 255 Gene3D AP2/ERF domain 81 139 IPR036955 GO:0003700|GO:0006355
Alju05g0975 255 SMART rav1_2 81 144 IPR001471 GO:0003700|GO:0006355
Alju05g0975 255 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 58 221 - -
Alju05g0975 255 MobiDBLite consensus disorder prediction 1 82 - -
Alju05g0975 255 MobiDBLite consensus disorder prediction 180 209 - -
Alju05g0975 255 PRINTS Ethylene responsive element binding protein signature 104 120 IPR001471 GO:0003700|GO:0006355
Alju05g0975 255 PRINTS Ethylene responsive element binding protein signature 82 93 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0975 Alju-ChrAlju05 21679023 21679790 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0975 74 253 AP2-EREBP Transcription Factor Family AT2G44940 53.883 2.96e-65 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju05g0975 AP2 3.1e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju05g0975 05 21679023 21679790 Alju05g0975 05 21679023 21679790 ECH