Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0966 ATGTTCATAAAACAGAGCCAGGATGATGGGGTTGATGAAGTTACATGGAAGATATCTCCTGTGAATCAAAGACTTCAAGCAGTTTCAAAACATATGCCTCAGATAATTCAAGCTTTGGCTGAGTCTTCTAGAATCAACTTATTGCCCATTGGGATTTCCTCAGAGAATCAGACTTCTCTGACTAAAGGTGGCAAATTTGAAAAGTTACTTACTTCACCAGCTGCAAAGGTTGCTGAGAGATCAACGGTGTCTAAGAATGAAAAAGGCTTGAAATGTATAAACCCAGACCAAGACATGGTTTTTAATGTCAGTTCAACTACTGAGAATGATTCTGGAGTAATTACTGGACAGAGCCCCTTCAGAACTCCACCATCTTTATCCTATTGCTCTGATAAGGTGCAGCTAGTCGGGGATGTTGAGCACAATGGACTATCTGACCAGCTTTATTTAAGACAGCATAAAAAGGCATTGCTTGAACTGTTAGATCAAGTCGAAGATGCCATATGTGTTGAAAATGCTACAATTTGCGATAAAAGTACAAATTTCATTAATTCTCAAGATGGAATTGCTGATAATCTGCCCATCGGAGTTGACAGTGCAGCAGAAAGCACTATAATTCATACACCAAAAGAGGCCATCAGTGGGTCCAATTCTAATTATTTGGTGTTGGAGGTATCTGAAAAACATAGGCTTGCTAGCTCATCTGCTTTGCAAGGCCCGTACAAGGTGCTTCGGTTAATAAATGAACAAACTGGAGAAGAGAAGGCTGTACACTTGTTGGAAGAATGGTCTTACAGTGTTGTTGCACCTGGAGATACCGTGAATATAATTGGTCAATTTGATGATCAGGGGAATTGTGATGTAGATCATGATAATAATTTTTTGATTGTACACCCAGTTATTCTGGTGTCTGGATCTCGGGTAGCTGCCAGTTTTTCTTGTCCAAGGAGAACTGTTTTAGATGAGAGGCTAAAATGTAATGAGTACTCAATTGCTGCATTAACTGGAACCTTACTTCACCAAATTTTTCAGGCTGGACTTATCAAGGATAGTCCTACAATAAACTTCTTAGAGGAATATGCACGATTGGTACTACACAGAAACATTGAAAGCTTGTATGCGTGTGGAGTGAATGAAAATGATGTACACAAAACCTTGATAGATGCTATCCCACGATTGTTAAATTGGATCAAACTGTTCAAGAATTCTGAGGAAAAGAAAGATGCTTATGTTGATTTTGGATGTGAAGATGGGATAAAGAAAGTTGAAATATCTGAGGTGATTGATATTGAAGAGGTGGCATGGGCTCCCAAATATGGTCTGAAAGGAATGATTGATGCTTCTGTCAGTGTGAAAGTTCTACCAAAGGAAAATGAAGCAGATGAGAAGGTCATGCCATTAGAGTTCAAAACTGGGAAAGCAATGTCTAGCCAGTCATCAATAGAACACCGTGCCCAAGTGATCTTATACACTCTTCTGATGTCTGAAAGGTACCTGAAGACTATTGATTCTGGTCTTCTATATTATCTCCAGTCAGATCTGACAGAGGGGATTGTAGTTCAAAGATCTGACTTAGTTGGGCTAATCATGCGACGTAATGAGCTTGCAAGTGATATTCTGAAGGCATTAACCACACAACAACTGCCTCCAATGTTACAGAGTCCAAGCATTTGCAGAGGTTGTCGCCATCTTAATGTTTGTAGCATTTATCATAAGGTTCAAGGAGGAAGTGCAAAGAGTAGTGGATTGGGAGATGTGTTTGATTCACATACTAATCATCTTTCTCCTACTTATTGTAAGTTCCTCTGCCATTGGGATCAGCTGATTGACTTAGAAGCAAAAGAGACTGAGCTTGCAAAGAAAGAGATGTGGAGATCACATACTTTTAGAAGTCATAACAGTACTGGCCTTTCTTCTGTCATCCTTGATGCTTCAAATAAGATTCCATGTCAGAAGTCTCTTAAAGATAATTGTTTCATTTATCGTTTTGTACGATGTGATCCATCTTCTCTATCTGAAGTGTCTGATGGTGATCCTTCTAATGCGTCAACAAATTATTTAGACCTCAAACTAAGAAGTGGAGACCATGTGATATTGAGCACTGAATCTAGCCGTCAAGCTATTGCTAGTGGGGTGATTACAGATATTAGTCATGCCCATGTTTCTGTTTCCTTTTCAAAGCGCCTGCGGATTCCTGGAAGCATCTCCTCTAGCCAAGATCTCTGTAAGCAGGTTTGGAGAATTGATAAGGATGAAACTGTGACTTCATTTGCTATTATGAGGTTTAATCTAGTACAACTTTTTCTCCAAAATGCTCAAAGTACTCATCTGAGGAAAATGATTGTTGATCTTGAGGCTCCTAAATTTGACAGTGGATCTATGGTCAGCCAGGACCCAGCAATATCATATGTGTGGTTACAGAAGAGTTTGAATGATGATCAGCGTAGATCAATCCTCAAGATTCTTACGGCAAAGGATTATGCACTCATACTAGGAATGCCTGGAACAGGAAAGACATCGACCATGGTTCAAGCTGTGAAAGCATTATTAATCAGAGGCACATCTATTTTGCTGACAGCCTATACAAACTCAGCTGTAGATAATTTACTTATCAAATTAAAAGCTCAGGGAATTGATTTTGTACGTATTGGAAGGCATGAAGCTGTGCATGAGGAGGTTAGAGAACACTGCCTTTCAGCAACAAATGTACAAAACGTTGATGAGATCAAAGTAAGGTTAGAACAAGTTAAAGTAGTTGCAGTTACATGCCTGGGCATCACCAGTCCCTTGCTTGCCAACAGGACTTTTGATGTATGCATTATGGACGAAGCTGGGCAGACAACTCTACCAGTGTCCTTGGGTCCTCTCATGTTTTCCTCAATGTTTGTACTTGTGGGTGATCACTATCAACTTCCTCCGCTTGTCCAGAGTGCAGAGGCCCGAGAGAATGGAATGGGGATAAGTTTATTTTGCAGGCTCTCAGAAGCACATCCACAAGCAATTTCAGCACTACAGAGTCAGTACCGTATGTGTCAGGGCATCATGGACCTGTCAAATGCCTTGATATATGGTGATAGGTTAAGGTGCGGTTCCACTGAGATTGCTAATGCTAAACTTGAGTTTTCTACATTAAAATGTGGCTTACCTTGGCTAAAAAGTGTTTTGAATCCAGGCAGGCCAGTGATTTTCATTGATACTGATAAATTGCCAGCTTTAGAGACGAGAGAACAGAAGACTATAAATAACCCGGTTGAAGCTCACTTAATAGCTGAGATAGTAAAGGCATTAATAAAAAATGGAATTGGAGAAGAACATGTTGGCATTATTACACCCTACAATTCCCAGGCAAATCTCATACGTCAGGCTGTTTGCATGACCTCGTTGGAAATTCATACTATTGACAAATACCAGGGTAGAGATAAAGATTGTATCTTAGTATCTTTTGTGAGGTCTAGTGAAAATCCATCATGCTGTGCTTCTTCTCTGCTAGGAGACTGGCACAGAATAAATGTCGCTCTCACACGTGCCAAGAAAAAGCTGATCATGGTGGGTTCTTGTAGAACCCTATCAAAAGTTCCACTACTGAAGCTTCTCATAAAAAAGGTTGAGCAGCAATCAGGTATTGTTAGTGTGTCTAAGAAGGATATCTATCAGAAAGGAGAGCTCAAAAGGTGTTCCCAGATGAGATGA 3690 0.4005 MFIKQSQDDGVDEVTWKISPVNQRLQAVSKHMPQIIQALAESSRINLLPIGISSENQTSLTKGGKFEKLLTSPAAKVAERSTVSKNEKGLKCINPDQDMVFNVSSTTENDSGVITGQSPFRTPPSLSYCSDKVQLVGDVEHNGLSDQLYLRQHKKALLELLDQVEDAICVENATICDKSTNFINSQDGIADNLPIGVDSAAESTIIHTPKEAISGSNSNYLVLEVSEKHRLASSSALQGPYKVLRLINEQTGEEKAVHLLEEWSYSVVAPGDTVNIIGQFDDQGNCDVDHDNNFLIVHPVILVSGSRVAASFSCPRRTVLDERLKCNEYSIAALTGTLLHQIFQAGLIKDSPTINFLEEYARLVLHRNIESLYACGVNENDVHKTLIDAIPRLLNWIKLFKNSEEKKDAYVDFGCEDGIKKVEISEVIDIEEVAWAPKYGLKGMIDASVSVKVLPKENEADEKVMPLEFKTGKAMSSQSSIEHRAQVILYTLLMSERYLKTIDSGLLYYLQSDLTEGIVVQRSDLVGLIMRRNELASDILKALTTQQLPPMLQSPSICRGCRHLNVCSIYHKVQGGSAKSSGLGDVFDSHTNHLSPTYCKFLCHWDQLIDLEAKETELAKKEMWRSHTFRSHNSTGLSSVILDASNKIPCQKSLKDNCFIYRFVRCDPSSLSEVSDGDPSNASTNYLDLKLRSGDHVILSTESSRQAIASGVITDISHAHVSVSFSKRLRIPGSISSSQDLCKQVWRIDKDETVTSFAIMRFNLVQLFLQNAQSTHLRKMIVDLEAPKFDSGSMVSQDPAISYVWLQKSLNDDQRRSILKILTAKDYALILGMPGTGKTSTMVQAVKALLIRGTSILLTAYTNSAVDNLLIKLKAQGIDFVRIGRHEAVHEEVREHCLSATNVQNVDEIKVRLEQVKVVAVTCLGITSPLLANRTFDVCIMDEAGQTTLPVSLGPLMFSSMFVLVGDHYQLPPLVQSAEARENGMGISLFCRLSEAHPQAISALQSQYRMCQGIMDLSNALIYGDRLRCGSTEIANAKLEFSTLKCGLPWLKSVLNPGRPVIFIDTDKLPALETREQKTINNPVEAHLIAEIVKALIKNGIGEEHVGIITPYNSQANLIRQAVCMTSLEIHTIDKYQGRDKDCILVSFVRSSENPSCCASSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIKKVEQQSGIVSVSKKDIYQKGELKRCSQMR 1229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0966 1229 FunFam DNA replication helicase Dna2 744 1007 - -
Alju05g0966 1229 FunFam DNA replication helicase 1008 1221 - -
Alju05g0966 1229 CDD DEXXQc_DNA2 809 1009 IPR026851 GO:0017116
Alju05g0966 1229 Gene3D - 735 1007 IPR027417 -
Alju05g0966 1229 Gene3D - 304 568 IPR011604 -
Alju05g0966 1229 CDD DNA2_N-like 304 539 - -
Alju05g0966 1229 Pfam AAA domain 987 1186 IPR041679 -
Alju05g0966 1229 FunFam DNA replication helicase Dna2 414 568 - -
Alju05g0966 1229 Pfam Domain of unknown function DUF83 459 568 IPR022765 -
Alju05g0966 1229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 808 1194 IPR027417 -
Alju05g0966 1229 CDD SF1_C_Upf1 1010 1203 IPR047187 -
Alju05g0966 1229 Pfam DNA replication factor Dna2 249 451 IPR014808 -
Alju05g0966 1229 Pfam AAA domain 810 901 IPR041677 GO:0004386
Alju05g0966 1229 Pfam AAA domain 912 977 IPR041677 GO:0004386
Alju05g0966 1229 Gene3D - 1008 1217 IPR027417 -
Alju05g0966 1229 PANTHER DNA2/NAM7 HELICASE FAMILY 216 1206 IPR045055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0966 Alju-ChrAlju05 21298008 21314653 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0966 1 951 Core DNA Replication Machinery Family AT1G08840 58.689 0.0 1077