Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0952 ATGGCCGGCCTTGACTTAGGTTCAGCATCTCACTTTGTTCATCAGCTTCAACAACGCCCTGATCTTCACTCCAATCATGAAGACGACAACCGGCTGGACCGGGACGACGATGACCCTCAAGGGCTTGAGCTAGTTACTCTGAACTCGGGAGGATCTGGCGGTGGAAGTGGCGGTGGCGGCGAGTTCAGTGCTCGCCGACCAAGGGGTCGGCCTCCTGGCTCGAAAAACAAGCTGAAACCGCCGGTGATCATCACCAGAGAAAGTGCAAACACCCTTAGGGCTCACATCCTTGAAGTCAGCAGCGGGTCCGATGTGTTTGACTCGGTGGCGACCTATTCAAGGAAGCGGCAGCGAGGGATCTGCGTCCTCAGCGGCAGTGGCACTGTCACCAACGTGACCTTGAGGCAGCCAACCGCCGCCGGGGCCGTCGTGACCCTTCACGGGAGGTTCGAGATACTGTCCCTGGCTGGATCTTTTTTGCCGCCTCCAGCTCCGCCTGGCGCCACCAGCCTGACGATATTTCTCGCCGGAGGGCAAGGTCAAGTTGTGGGAGGAAATATTGTTGGTGCCTTAATAGCTGCTGGACCTGTTATTGTTATTGCTTCCTCATTTTCAAACGTAGCATATGAGAGATTGCCCTTAGATGAAGAAGAAACCCTACAGATGCAGCAAGGTCAATCTTCCGGCAGTGGCGGTGGCGGTGGCGGCAACTCGTTCCCTGACCCGTCTTCAGGGCTTCCGTTCTTCAATCTGCCGTTAAACATGCCGCAGTTACCTGTTGATGGCTGGGCTGGAAACTCATCAGGTGGTGGAAGGCAACCATATTAG 828 0.558 MAGLDLGSASHFVHQLQQRPDLHSNHEDDNRLDRDDDDPQGLELVTLNSGGSGGGSGGGGEFSARRPRGRPPGSKNKLKPPVIITRESANTLRAHILEVSSGSDVFDSVATYSRKRQRGICVLSGSGTVTNVTLRQPTAAGAVVTLHGRFEILSLAGSFLPPPAPPGATSLTIFLAGGQGQVVGGNIVGALIAAGPVIVIASSFSNVAYERLPLDEEETLQMQQGQSSGSGGGGGGNSFPDPSSGLPFFNLPLNMPQLPVDGWAGNSSGGGRQPY 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0952 275 Gene3D - 92 227 - -
Alju05g0952 275 ProSiteProfiles PPC domain profile profile. 89 226 IPR005175 -
Alju05g0952 275 MobiDBLite consensus disorder prediction 219 234 - -
Alju05g0952 275 MobiDBLite consensus disorder prediction 15 80 - -
Alju05g0952 275 MobiDBLite consensus disorder prediction 218 252 - -
Alju05g0952 275 FunFam AT-hook motif nuclear-localized protein 92 219 - -
Alju05g0952 275 CDD DUF296 93 204 IPR005175 -
Alju05g0952 275 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 28 231 IPR014476 GO:0003680
Alju05g0952 275 MobiDBLite consensus disorder prediction 20 41 - -
Alju05g0952 275 SUPERFAMILY AF0104/ALDC/Ptd012-like 89 222 - -
Alju05g0952 275 Pfam Plants and Prokaryotes Conserved (PCC) domain 93 206 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0952 Alju-ChrAlju05 20808501 20809328 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0952 1 275 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 62.290 1.28e-98 288