Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0934 ATGGAGTTCCACAAACTCGAAATCCCCAAAACTAACAGTGACCAAGTCGTCATCAACATGGATCACCAGCACCAACAACAACGAGGCCCAAACCCTAAACAAGATCATAATTCTTCTCAACCCTATCCTCATCCCAGAAACAGAACACTACAACGCCTCAATTTCTCCAAACCAAAATCACGTTTTGAGGAGATCAACTACCCAATCTCAACAAAACCAACTTACAATCCCATCCCAGAATCCGATGATCACCAACCAGAAAACCCTACTAACTACTCTTCCACCGACGACGACGACGACGACGAATGGTTCGAGAACTTGGACGAGTACGGCTGCGATGACGATGACGAAGCCACCGGAAAGTACAGAAAGAAGAGGAAGCTGAAGATCAACAAGAGGGCTTTACTTGAGTGGACTCTGTTCCTCATCATCATGACTTGCCTGATATGTTCACTCACTATCAAATCCCTCGAGGACAAGACTCAGTACGGCCTAGAAATCTGGAAATGGTGCTTGTTGGTGATGGTTATCTTCTGTGGCCGACTCGTCTCCGAATGGGTGGTGCGAATCCTCGTGTTTATCATCGAACGAAACTTCATGTTGAGAGAGAAAGTACTCTACTTCGTGTACGGTCTTCGAAAGAGTTTTCAGAACTGCGTATGGCTAGCCCTAGTTTTAATGGCATGGATGATTATGTTCCACGACGCTCACAATAAAAACAAAGTCCTCAAGAAGTTCTTTAGGGCTCTCGTCGCAATCCTCGTCGGGGCAACCATATGGTTACTAAAAATAGTGTTCGTTAAGGTTCTGGCGTCGTCGTTTCATGTGGCGGCTTTCTTTGACAGAATGAAAGAGAGTGTTTTCCATCACTATGTGTTGGAGGCGCTGTCGGGGCCGCCGTTGGACGAGGAGGAGATGGACCTGCCGCAGCGGCACTTGCAGGCCTCGAGGCCGGCTAGGCTGAGGTACGAGAAGTCTCAGCCGTTGAAGTCGAGGTCGAGGAAGGGAGATGGGTCGAGGAGGATTGATATAGAGAAGCTCAAGAGGCTGAGCATGGACGGGAGAGCGACGGCGTGGAGCGTGAAGAGGTTGGTGAGCTATGTGATGTCGTCGGGCTTGTCGACGATTTCGAGGACGGTGGACGATTTTGCTAACGCCGAGTCGGAGATTAATAGTGAGTGGCAGGCTAGGACTTGTGCTCAGAAGACATTCAAGAATGTTGCAAAGGAAGGAGCAAAGTACATAGAAGAAGAAGATTTACTGAGATTCTTGAAGAGAGACGAAGTGTACATGATATTTCCTTTATTTGGAGGAGCACTTGAAACTGGAAAAATTACCAAGTCTTCATTCCGAAATTGGGTGGTACAAGCTTACGTAGAGAGAAAAGCATTGGCTCATTCACTGAACGATACAAAAACGGCAGTGCGTCAACTTCACAAACTGGCGAGTGCAGTAGTAATAGTGATAATAACAGTGGTGTCTCTCTTGGTGATGGGTTTGGCCACGACTAAAGTCATCTTCGTTGTCACTTCTCAATTATTGCTCATAGGTTTTGTGTTCCAAAATATGTGCAAAACTGTCTTTGAATCCATTATCTTTGTCTTCATCATGCACCCTTTCGATGTTGGAGATCGTTGCGTCATTGATCGCATTCAGATGATTGTAGAAGAGATGAATATATTGACAACAGTATTCTTAAGATATGACGGCGAGAAAATATATTATCCAAATTCAGTTCTTCTGACGAAACCTATAAGCAATTTCAGAAGAAGCCCAGACATGGCTGACGCCGTGGAATTCACTGTCGATGCCTCTACTTCTATGGACAATATCACTGCCCTCAAGAAGGCCATTCAAGCGTACATTGAGAGCAAACCCAAGTACTGGAATCCAAAACACGTAGTGATAGTGAAGGAGATAGAGAACATGGACAAGATGAAGATGGCTCTCTACGTTCAACACACCATTAACCATCAAAACTTCAGCGAGCGAAATGGCCGGCGATCGGAGCTTTTGCTCGAGCTAAAGAAGATCTTTGAGAGCCTTGGCATTAAGTATCGTCTTCTTCCTCAAGAAGTACATCTCACACAGGTTAACTTTGGCAACAATAATGGAGCCTTCCCACTTGCATCTTCATAA 2139 0.4558 MEFHKLEIPKTNSDQVVINMDHQHQQQRGPNPKQDHNSSQPYPHPRNRTLQRLNFSKPKSRFEEINYPISTKPTYNPIPESDDHQPENPTNYSSTDDDDDDEWFENLDEYGCDDDDEATGKYRKKRKLKINKRALLEWTLFLIIMTCLICSLTIKSLEDKTQYGLEIWKWCLLVMVIFCGRLVSEWVVRILVFIIERNFMLREKVLYFVYGLRKSFQNCVWLALVLMAWMIMFHDAHNKNKVLKKFFRALVAILVGATIWLLKIVFVKVLASSFHVAAFFDRMKESVFHHYVLEALSGPPLDEEEMDLPQRHLQASRPARLRYEKSQPLKSRSRKGDGSRRIDIEKLKRLSMDGRATAWSVKRLVSYVMSSGLSTISRTVDDFANAESEINSEWQARTCAQKTFKNVAKEGAKYIEEEDLLRFLKRDEVYMIFPLFGGALETGKITKSSFRNWVVQAYVERKALAHSLNDTKTAVRQLHKLASAVVIVIITVVSLLVMGLATTKVIFVVTSQLLLIGFVFQNMCKTVFESIIFVFIMHPFDVGDRCVIDRIQMIVEEMNILTTVFLRYDGEKIYYPNSVLLTKPISNFRRSPDMADAVEFTVDASTSMDNITALKKAIQAYIESKPKYWNPKHVVIVKEIENMDKMKMALYVQHTINHQNFSERNGRRSELLLELKKIFESLGIKYRLLPQEVHLTQVNFGNNNGAFPLASS 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0934 712 MobiDBLite consensus disorder prediction 12 56 - -
Alju05g0934 712 SUPERFAMILY Sm-like ribonucleoproteins 529 588 IPR010920 -
Alju05g0934 712 MobiDBLite consensus disorder prediction 1 100 - -
Alju05g0934 712 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 21 698 IPR016688 -
Alju05g0934 712 MobiDBLite consensus disorder prediction 67 92 - -
Alju05g0934 712 FunFam Predicted mechanosensitive ion channel 539 588 - -
Alju05g0934 712 Gene3D - 539 588 IPR023408 -
Alju05g0934 712 Pfam Mechanosensitive ion channel 480 685 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0934 Alju-ChrAlju05 20401083 20407082 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0934 27 699 Mechanosensitive Ion Channel Family AT5G12080 44.823 0.0 597