Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0885 ATGTCCTTCAATCAATCAAGGTCCGATAAGAGCGACAGTCAGTACCGTAAATCCGGGCGACCAGGGAGCTTCAATCAGCAGAGAGGTTCCTCAGGCGCGTACGTTAAGGGCGGTGGCGGCGGGCCCGCGCCTTCTCCCGGGATCACTTCGGGTGCCTTACAGTCCTCTCATCGGAGTTTTAAGAGGTCAAATAATCCACATGGTGGGCAATCTAGGGTAAACCCTCCCCCTGTGAATTCAGCCGAGTCTAATGGTGCTTCTACAGTCTGGTCCATACCAAATGGTGCCCATACACAACAATCGCCTGGAGCATCTGATGCGCCATTTACAAATGCAACTGCCAAATCATCTGAACCCTCATCTGTACAGAAGAGCACCAGAGTTGTTCCAAAAGCTCCAACTCCTCGACCTACCGCCGTGAATTCTGATGCAGCAGCTCCTACAACCCCTGCCAAGGTCTCTGAAGATTCATCCAAGCCATTTGCTTTCCAGTTTGGGTCCATTAGTCCCGGTTTCATGAATGGGATTTCAATTCCTGCTCGCACAAGCTCAGCTCCTCCAAATTTGGACGAGCAGAAAAGAGATCAGGCTCGTCATGGTTCTTTAAGACCTGTGCCTTCAGTGCCAACACCTCCAAAGCCGCTGCCACCAAGGAATGATGGTGGTGTTACGGACCAATCTAATGCTGGGGAGGCTCATTTAGTGAACAAAGTGAAAAAGGAGGAGCAGGCATCATCTTTGCCCCCATCAAGCCAGATGCAAAAGCCATCCATTGCCATGACTGGGATTTCGATGGCAATGCCATATCATCACCAATCACAGGCACCTGTACAGTTTGGTGGTCCTAACCCACAGATTCAATCTCAGGGAATGCCAGCAGCATCTCTTCAGATGCCTATGCCTATACCTTTGCCAATGGGAAATGTCGCACAAGTACAACAGCAGGTTTTTGTTCATGGTCTTCATCTTCCAATTCATCATCAGGGAATTATGCATCAAGGCCAAAACTTGAGTTTCACTCCTCAAATGGGTCATCAGATGCCCCATCAGTTAGGTAGTATGGGTATTAACATGAACCCACAATATTCCCAACAGCAAGGTGGAAAATTTGCTGGTCCTCGCAAAACCACTACTGTCAAGATTACTCATCCTGAGACACGTGAAGAGCTGAGGCTGGACTTTGACAAAAAGGCAGATTCACATTCAGAAGGCATGATCTCAGGTGCTAGGTCTTATGCTAATGTTCCTTCTCAGTCTCAACCTGTTCAATCATTTGCTGCTTCACATCCCCTCAACTATTTTCCCTCTAGCACTTACAGTAGTAGCTCTCTTTTTTACCCCACTAGTTCTGTTCCTCTATCAAGCAGCCATATAACTCCTAATTCTCAGCAACCAAGATTTAGTTATCCAGTGAGTCAAGCCCCCCCAAATGCAGGTCTTAACAATCAATTATCTATTGGTTCCTTTTCTGTTAATAAAAATGGTGCTTCTGTACCTGGCCTTGGTGAAACACCAAATCTAGAACATTCTCGTGATGTGCAGAAGGTGATGTCATCAGGTACATCTGGAGTAACTCATGCTAGTATCAAACCAGGTGGCGGCTCTGGTATTGTGGACTCGACAATCACCAATTCTAGCATCTCTGTTGTTAAAACAAGTGAAACTCCCAGCTATTTAGGGTCATCTAATTACATTGGTTTCACTGTGTCTCATAAAGGCTCTGATAATTTTTTTGAGACCTCTTCACAGCAGTCTAAGTCATCCAGTGATTATTTTGTTTCAAGGCCAGTGCCAAAACAACCTGCTGCGGGATCTGCTGAGAAGCTTGCATCTACTCCCTTGATGCCTTCTTCAGCTGTTGTGAGTGAGAACTCTGTCTCGGTTGTGCCCAACAATGAAGGCAGAATGAAGGAATCTCTTAGCAGGTCAAACTCTTTAAAAGATAATCACAAGAAAACAGGGAAGAGAGGCCAACCGCAGCATCAGGTTACTGTACAATGTCCTACAGTGGTTAATGTCCCTTCTAAAGCTGGAGATAGTGTTATGCTTGATCGAGAAGTTTCTGATACTGTAGAAAACAAAACAAAGGCTTGTGTAGTAATAACCAGTGAAGATAACTCTAGCACACCAGAGGCATTATCAGCTACAGTTAGCAGTGATATTGGTCCTAATGCTAATGAAATGAACATTGGCCCTCCTGCAGAAGGTTCTGTCTGCATTTCAGCTGAAGGAGTTGGTGCCTTTGCTGTTGGTAGTTTGGATAACCATGAGCATGATAAACTAGAGGAATCATCACAACAGGATAAGCTTTCAAAGATGAATATGCTTGAGGTGGGTGATAAAAATGAAAGATTTTCTGAAGTACTTAAACAAAAAAGTGATGACATTGGAACTAAGTTTAAACAAACAGAACAAGATGCAGCCAAGGAATTGCAAGATGTACAACAAAGATTGGAATCACTGGCTGAATCTACAAATTGTAGATCAGAATATGACAAGAAGGGTGATAATTTAGATGTGCCTACCTCAAATGATTTGGATTCTAGAGATATCTCTTTAAATAGAAATGATAGTACAGTTAGCAATGAATCTATTTCTGCAAATTCTGCCACATCTGATAAGAATTCTAGTGATCTCCCAGAAGCCACTTCAAAACATAGCAAGGATTTGCCAGAGAATGCAGACAGTGGCTCAGTGTCCCTTTCAACGTCAGTTAACAAGGATAGACCTATTTTGGAGCCAAATAAGGTGAAAACTACAACAAAAGTAAAGAAGAAAAGAAGGGAGACTCTTCAGAGAGCAGATGCTGCTGGATCAACTTCAGATCTTTATAATGCATACAAGAGACCTGAGGAAAAGAAAGAAGTAGTTATAAGTTCAGAGAGCAAAGAAAGTACTTCATCTGGAAGTTTAAAGCAGTTGCCTAATGAGGCTGCTCAATCAGATGCTATGGCAACTGAGAAAGGTGGTGATGATAAAGCTGAGCCTGAAGACTGGGAGGATGCCGCTGACATGTCTTCCCCAAAATTGGAAGTTGTGGATAAAAAACAACAGGTCAGCGATGGAAGTGAAATTACTGCTAAAAAATACTCTAGAGATTTCCTTTTGAAATTTGAAGAGCAGTGCCTTGATCTTCCTAAGGGTTTTAAAATTAAAGAAGACATTGCTGAGGCTTTGATGAATTCTAATATTACTGGTTTTCATGTTGAACGTGATTCACATCCTAGTCCAGGAAGAATTATGGATAGGTCAGGTGGGATGCCTAGAATGGACCGCCGCGGGTCTGGGCATTTTGAAGAAGACCGGTGGAGTAAAGTCCCTGGAACTTTAAATTCTGGACGTGACATGCGTATGGATGGTTTTGGAGGTAATACAGGATTTCGACATAGCCAAGGAGGCAATTTTGGTGTTTTGAGGAATCCACGTGCTCAGACGCCTCTGCATTATGCTGGAGGCATCCTTTCTGGACCAATGCAATCAATGGGAAATCAGGGAGTTATGCAGAAGAATAGCCCTGATGGTGAGAGGTGGCAACGAGCAACTAACTTCCAGCAGCGGAGTTTAATTCCTTCTCCTCAGACCCCACTACAAATGATGCATAAAGCTGAGAAAAAGTATGAGGTTGGTAAGGTGACAGATGAGGAACAGGCAAAGCAGAGACAGTTGAAAGCCATTTTGAACAAGTTAACTCCTCAGAATTTTGAGAAACTTTTTGAGCAGGTAAAAGCTGTTAATATTGACAATGCTGCCACCCTTACTGGTGTAATCTCTCAAATATTTGAGAAGGCTCTAATGGAGCCTACCTTCTGTGAAATGTATGCCAATTTCTGCTTACACCTAGCTGCTGAGTTGCCTGATTTCAGTGAAGACAATGAAAAGGTAACCTTTAAGAGATTATTGTTAAACAAGTGTCAAGAGGAATTTGAGAGGGGTGAAAGAGAGCAAGAAGAAGCTAATAAGGATGATGAGGGTGAGGTCAAGCAGTCTGATGAAGAGAGGGAAGAGAAACGAGTTAAGGCAAGGAGACGCATGTTAGGTAATATACGGTTGATTGGTGAGTTATATAAGAAAAGAATGTTGACAGAGAGGATAATGCATGAGTGCATCAAGAAGTTACTGGGATCGTATCAGGATCCTGATGAGGAAGACATTGAAGCTTTGTGCAAGCTAATGAGTACCATTGGGGAGATGATTGATCATCCCAAAGCCAAGGAACACATGGATGCATATTTTGAAAGGATGAAATTGTTATCGAACAACATGAATTTGTCTTCTCGAGTTAGATTCATGTTGAGGGATGCCATTGATCTTAGAAAGAACAAATGGCAACAGAAGCGGAAAGTTGAAGGTCCAAAGAAGATCGAGGAGGTGCACAGAGATGCTGCCCAAGAGAGGCAGGCCCAAACTGGGAGGCTGGGACGTGGTCCAGGCAATGCATCATCAAGAAGGATACCTATGGAATTTAGTCCAAGAGGGTCATCTGTGTTATCTCCTAACAGCCCTATGGGGATGCGTGGGCTTTCTGCTCAAGGTCACAGTGGTGGCTCTCAGGATGTTCGTCAAGATGATAGACCATCATATGAGGCTAGAAATTTGTCCGTCCCTTTGCCTCAAAGACAAAGTGATGATTCTATAACCTTGGGTCCCCAAGGTGGTCTTGCACGAGGAATGTCCTTTAGGGGGCCTGCTGTAATTTCAAGTTCTCCTGCTCCTGATGTGCTCCCAGGTGCAGATTCTCGAAGAATGACATCTGGCCTTAATGGTTATAGCACTTCATCAGAGCGTGCTATGTACAGCAGTACAGAAGATCAAATGCCAAGATATGCTACAGATAGATTTGCTGGTCCATCCTCTCATGACCAATCAGCTGTTCAGGAGCGTAATATTAATTATGGCAATAGGGAGTTGAGAAATGCGGACCGGAGTCTTGAGAGACCTTTTGCAACTTCACCTCCTGGAGTGCAAGGATCTGTGGTCTCCAATAATGCTCCGTCAGGGAAGGTTTGGCCAGAAGAACGACTGCGGGACATGTCCATGGAAGCAATTAAAGAATACTACAGTGCTAGAGATGTAAAAGAAGTTGCGCTATGTGTCAAAGATCTAAACTCTCCAAGCTACCATCCCTCGATGATTTCTCTATGGGTCACAGACTCGTTTGAGAGAAAGGACACGGAAAGAGATCTTTTGGCCAAATTACTAGTGAGCCTTGCAAAGTCTCAGGATGGCCAAATTACCTTGAGTCAGGCTCAGCTTATCCAAGGGTTTGAATCTGTTCTAAGTGGTCTGGAAGATGCCGTTAATGATGCCCCCAGAGCCCCGGAATTTCTGGGCCGAATTTTTGCCAGAGTTGTGACGGAAAATGTTGTCTCTTTGAAAGATATCGGCCAACTATTACGTGAAGGTGGGGAGGAACCCGGTCAACTCTTAGAAATTGGACTCGCAGGCGATGTTCTGGGAAGCACCTTCGAGGCCATAAAAATGGAGAAGGGGGATGCTGTTTTGAGTGAGATACGCTTAAACTCCAACTTGAGGCTGGATACTTTCCGGCCGCCCAATGCTGCTGTATCAAGAAAGTTAGAAACATTTATTTAG 5592 0.4405 MSFNQSRSDKSDSQYRKSGRPGSFNQQRGSSGAYVKGGGGGPAPSPGITSGALQSSHRSFKRSNNPHGGQSRVNPPPVNSAESNGASTVWSIPNGAHTQQSPGASDAPFTNATAKSSEPSSVQKSTRVVPKAPTPRPTAVNSDAAAPTTPAKVSEDSSKPFAFQFGSISPGFMNGISIPARTSSAPPNLDEQKRDQARHGSLRPVPSVPTPPKPLPPRNDGGVTDQSNAGEAHLVNKVKKEEQASSLPPSSQMQKPSIAMTGISMAMPYHHQSQAPVQFGGPNPQIQSQGMPAASLQMPMPIPLPMGNVAQVQQQVFVHGLHLPIHHQGIMHQGQNLSFTPQMGHQMPHQLGSMGINMNPQYSQQQGGKFAGPRKTTTVKITHPETREELRLDFDKKADSHSEGMISGARSYANVPSQSQPVQSFAASHPLNYFPSSTYSSSSLFYPTSSVPLSSSHITPNSQQPRFSYPVSQAPPNAGLNNQLSIGSFSVNKNGASVPGLGETPNLEHSRDVQKVMSSGTSGVTHASIKPGGGSGIVDSTITNSSISVVKTSETPSYLGSSNYIGFTVSHKGSDNFFETSSQQSKSSSDYFVSRPVPKQPAAGSAEKLASTPLMPSSAVVSENSVSVVPNNEGRMKESLSRSNSLKDNHKKTGKRGQPQHQVTVQCPTVVNVPSKAGDSVMLDREVSDTVENKTKACVVITSEDNSSTPEALSATVSSDIGPNANEMNIGPPAEGSVCISAEGVGAFAVGSLDNHEHDKLEESSQQDKLSKMNMLEVGDKNERFSEVLKQKSDDIGTKFKQTEQDAAKELQDVQQRLESLAESTNCRSEYDKKGDNLDVPTSNDLDSRDISLNRNDSTVSNESISANSATSDKNSSDLPEATSKHSKDLPENADSGSVSLSTSVNKDRPILEPNKVKTTTKVKKKRRETLQRADAAGSTSDLYNAYKRPEEKKEVVISSESKESTSSGSLKQLPNEAAQSDAMATEKGGDDKAEPEDWEDAADMSSPKLEVVDKKQQVSDGSEITAKKYSRDFLLKFEEQCLDLPKGFKIKEDIAEALMNSNITGFHVERDSHPSPGRIMDRSGGMPRMDRRGSGHFEEDRWSKVPGTLNSGRDMRMDGFGGNTGFRHSQGGNFGVLRNPRAQTPLHYAGGILSGPMQSMGNQGVMQKNSPDGERWQRATNFQQRSLIPSPQTPLQMMHKAEKKYEVGKVTDEEQAKQRQLKAILNKLTPQNFEKLFEQVKAVNIDNAATLTGVISQIFEKALMEPTFCEMYANFCLHLAAELPDFSEDNEKVTFKRLLLNKCQEEFERGEREQEEANKDDEGEVKQSDEEREEKRVKARRRMLGNIRLIGELYKKRMLTERIMHECIKKLLGSYQDPDEEDIEALCKLMSTIGEMIDHPKAKEHMDAYFERMKLLSNNMNLSSRVRFMLRDAIDLRKNKWQQKRKVEGPKKIEEVHRDAAQERQAQTGRLGRGPGNASSRRIPMEFSPRGSSVLSPNSPMGMRGLSAQGHSGGSQDVRQDDRPSYEARNLSVPLPQRQSDDSITLGPQGGLARGMSFRGPAVISSSPAPDVLPGADSRRMTSGLNGYSTSSERAMYSSTEDQMPRYATDRFAGPSSHDQSAVQERNINYGNRELRNADRSLERPFATSPPGVQGSVVSNNAPSGKVWPEERLRDMSMEAIKEYYSARDVKEVALCVKDLNSPSYHPSMISLWVTDSFERKDTERDLLAKLLVSLAKSQDGQITLSQAQLIQGFESVLSGLEDAVNDAPRAPEFLGRIFARVVTENVVSLKDIGQLLREGGEEPGQLLEIGLAGDVLGSTFEAIKMEKGDAVLSEIRLNSNLRLDTFRPPNAAVSRKLETFI 1863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0885 1863 ProSiteProfiles MI domain profile. 1673 1799 IPR003891 -
Alju05g0885 1863 MobiDBLite consensus disorder prediction 1566 1595 - -
Alju05g0885 1863 MobiDBLite consensus disorder prediction 946 960 - -
Alju05g0885 1863 MobiDBLite consensus disorder prediction 611 639 - -
Alju05g0885 1863 MobiDBLite consensus disorder prediction 578 662 - -
Alju05g0885 1863 Coils Coil 804 824 - -
Alju05g0885 1863 FunFam Eukaryotic translation initiation factor 4G 1219 1454 - -
Alju05g0885 1863 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 356 1862 IPR045208 GO:0003743
Alju05g0885 1863 Coils Coil 1301 1321 - -
Alju05g0885 1863 MobiDBLite consensus disorder prediction 796 1023 - -
Alju05g0885 1863 MobiDBLite consensus disorder prediction 826 840 - -
Alju05g0885 1863 MobiDBLite consensus disorder prediction 986 1023 - -
Alju05g0885 1863 MobiDBLite consensus disorder prediction 1085 1104 - -
Alju05g0885 1863 MobiDBLite consensus disorder prediction 640 655 - -
Alju05g0885 1863 MobiDBLite consensus disorder prediction 578 594 - -
Alju05g0885 1863 MobiDBLite consensus disorder prediction 176 190 - -
Alju05g0885 1863 Pfam MA3 domain 1677 1788 IPR003891 -
Alju05g0885 1863 FunFam Eukaryotic translation initiation factor 4G 1667 1862 - -
Alju05g0885 1863 Gene3D - 1219 1454 - -
Alju05g0885 1863 MobiDBLite consensus disorder prediction 450 476 - -
Alju05g0885 1863 Pfam MIF4G domain 1219 1441 IPR003890 GO:0003723|GO:0005515
Alju05g0885 1863 Gene3D - 1669 1863 - -
Alju05g0885 1863 MobiDBLite consensus disorder prediction 141 164 - -
Alju05g0885 1863 SUPERFAMILY ARM repeat 1213 1443 IPR016024 -
Alju05g0885 1863 SMART ma3_7 1674 1790 IPR003891 -
Alju05g0885 1863 MobiDBLite consensus disorder prediction 961 980 - -
Alju05g0885 1863 MobiDBLite consensus disorder prediction 893 909 - -
Alju05g0885 1863 MobiDBLite consensus disorder prediction 1441 1545 - -
Alju05g0885 1863 MobiDBLite consensus disorder prediction 1310 1338 - -
Alju05g0885 1863 MobiDBLite consensus disorder prediction 841 878 - -
Alju05g0885 1863 MobiDBLite consensus disorder prediction 1492 1516 - -
Alju05g0885 1863 MobiDBLite consensus disorder prediction 17 32 - -
Alju05g0885 1863 MobiDBLite consensus disorder prediction 796 813 - -
Alju05g0885 1863 SMART if4_15 1219 1441 IPR003890 GO:0003723|GO:0005515
Alju05g0885 1863 MobiDBLite consensus disorder prediction 48 128 - -
Alju05g0885 1863 MobiDBLite consensus disorder prediction 1068 1115 - -
Alju05g0885 1863 MobiDBLite consensus disorder prediction 1 227 - -
Alju05g0885 1863 MobiDBLite consensus disorder prediction 1441 1465 - -
Alju05g0885 1863 SUPERFAMILY ARM repeat 1669 1860 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0885 Alju-ChrAlju05 18903474 18911070 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0885 1 1862 Eukaryotic Initiation Factors Gene Family AT3G60240 45.268 0.0 1274