Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0854 ATGCAGGGATCGGAAGTAGAGGGCACTAATGCGAGGAATCCAAATGGGGCTTCGCTGGAAGAGAGTCCGACATTGAGTGAGCAGAAGAAAACTTGCGCCGATTGTGGCACCATCAAGGCCCCTCTCTGGCGCGGCGGTCCAGCTGGGCTGAAGTCACCGTGCAACGCTTGTAGAATCAAAAGCAGGAAGAAGAAGAGAGTGATTCTGGGTTTGAAAGGGAAAAGAAGCAATAGTAATAATGACAGCAATGGAAGCAGCAAGATTGGGGATAGTTTGAAGCAGAGTTTGGATAGTAATCCTGATCTTTGCTTGACGGATACATGCAAAAAGCACAAGTTCGTTATTCCTCTAATAGCATCTGTTTTTGCTTTCATTATTGTAATCTTGGTTTCGCTTGGAATTTGGATCTTCAGAACTAAAAGACTGAAAGATTATCTCAGGCTTGTAGAATTTTAA 456 0.4408 MQGSEVEGTNARNPNGASLEESPTLSEQKKTCADCGTIKAPLWRGGPAGLKSPCNACRIKSRKKKRVILGLKGKRSNSNNDSNGSSKIGDSLKQSLDSNPDLCLTDTCKKHKFVIPLIASVFAFIIVILVSLGIWIFRTKRLKDYLRLVEF 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0854 151 Gene3D - 27 90 IPR013088 GO:0006355|GO:0008270
Alju05g0854 151 MobiDBLite consensus disorder prediction 73 92 - -
Alju05g0854 151 MobiDBLite consensus disorder prediction 1 27 - -
Alju05g0854 151 Pfam GATA zinc finger 32 65 IPR000679 GO:0006355|GO:0043565
Alju05g0854 151 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 28 67 - -
Alju05g0854 151 PANTHER OS01G0976800 PROTEIN 13 94 - -
Alju05g0854 151 CDD ZnF_GATA 31 66 IPR000679 GO:0006355|GO:0043565
Alju05g0854 151 ProSiteProfiles GATA-type zinc finger domain profile. 26 62 IPR000679 GO:0006355|GO:0043565
Alju05g0854 151 MobiDBLite consensus disorder prediction 69 92 - -
Alju05g0854 151 SMART GATA_3 26 76 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0854 Alju-ChrAlju05 17941424 17943111 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0854 20 133 C2C2-Gata Transcription Factor Family AT5G49300 40.351 5.77e-19 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Alju05g0854 GATA 6.7e-11 CL0167