Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0841 ATGGCTTCACCATCTTCGCCGGTGGATTCTACTCCTCCTGCTGATCCGCCTTCCGCTGTGCCTCTTCCCCTCCCGGCGCCACCGTCGTCTCGCCGTCTTCCGCCGCCGTGCTGGTCCCACGATGAGACTGTGGCTCTCATCGACGCGTATCGTGACAAGTGGTATTCCCTTGGTCGGGGTAATCTGAAGGCTACTCATTGGCAAGAGGTCGCCGATGCAGTTACGGGTCGTTGTCCTAATGCGTCTCCGCCGAAGACCGCCGTCCAGTGCCGCCATAAGATGGAGAAGCTCCGAAAGCGGTACCGCACCGAGATCCAGCGTGCCCGGTCCATGCCCGTTGCCCGGTTCAATTCGTCCTGGGTCCATTTCAAGCGCATGGATTCTATGGAAAAAGGTCCTTCCCCGGTTAAAGCTGAGAACAATTCCGATAGCCCTGATGAGATTGACCACGACGATGACGATGACGATCTAGATTTGTATGAGGAATTTAAGAATGCTGGTGCCGGGTCGAACACCAGGAGCTTGAATAAATTGTACAGGAACGGAATCGGCGGTGGCTCCGATGGCGGCGGCATCGGTGGAGGTGGATTTCGCATTAGGATTCCGACTGGGGTGAGTATAGCACAACCGGGGACCAAATTTTACGGGAAGCTTGCTGATCAGAAATTTAACTCGAATTCGAACTCAGCCACGCCAAGCTCTAATTGCAGCCCAAATTACGGAACAAGGATTTTGAAAGAGAGAAGCGGATTGGAGAAGAGGGAGAGAGAGAGGGATCCAGTGGGAGAGATGGTGACTGCAATTAAGGTTTTGGGAGATGGATTTGTGAGGATGGAGCAAATGAAGATGGAGATGGCGAGAGAGATTGAAACTATGAGGATGGACATGGAAATGAAACGTACTGAGATGATTTTGGAGTCTCAACAACGGATCGTTGAGGCATTCGCTAAGGCAGTTTCAGAGAAGAAGAAGAACAAGGCTAAGAGAATGCCATCACCTTCAGAAGAACCATAG 1014 0.5217 MASPSSPVDSTPPADPPSAVPLPLPAPPSSRRLPPPCWSHDETVALIDAYRDKWYSLGRGNLKATHWQEVADAVTGRCPNASPPKTAVQCRHKMEKLRKRYRTEIQRARSMPVARFNSSWVHFKRMDSMEKGPSPVKAENNSDSPDEIDHDDDDDDLDLYEEFKNAGAGSNTRSLNKLYRNGIGGGSDGGGIGGGGFRIRIPTGVSIAQPGTKFYGKLADQKFNSNSNSATPSSNCSPNYGTRILKERSGLEKRERERDPVGEMVTAIKVLGDGFVRMEQMKMEMAREIETMRMDMEMKRTEMILESQQRIVEAFAKAVSEKKKNKAKRMPSPSEEP 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0841 337 Coils Coil 91 111 - -
Alju05g0841 337 MobiDBLite consensus disorder prediction 9 34 - -
Alju05g0841 337 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 14 322 IPR044823 -
Alju05g0841 337 MobiDBLite consensus disorder prediction 1 36 - -
Alju05g0841 337 FunFam Trihelix transcription factor ASIL2 38 103 - -
Alju05g0841 337 Pfam Myb/SANT-like DNA-binding domain 36 129 IPR044822 -
Alju05g0841 337 MobiDBLite consensus disorder prediction 127 156 - -
Alju05g0841 337 Gene3D - 38 103 - -
Alju05g0841 337 SMART 118neu2 45 134 IPR006578 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0841 Alju-ChrAlju05 17136220 17137233 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0841 37 129 Trihelix Transcription Factor Family AT3G14180 37.634 6.40e-17 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Alju05g0841 Myb_DNA-bind_4 2.4e-21 CL0123