Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0835 ATGGATGAGATATTGTACAGCTTGACGCTGTTCTTCATCTTAATCCTTATATCCTTCATACTCTCAGTAATATCCTATTGTTGCACCACCACACAGTCCAACACAGCAAGCCAATCATCACATGGTGGGGTTGATCATAGCATTAATATTATTAATGATACAGAGACGAACCAGACGGTGGTGACGACGACGGTGACTGTAGTAGTGGAGCCATCATGCTTGGTGGATCAAGCTAGGGTTTGCAGTTCATCATCGTCATCTTCATCAAAAGCCAATATTAATAAGTTGTGTGATGATAAAGAAGATGATGGTGATAATGGTGTTTCAAGTCCTTGTTGCTGCTCAATATGCTTGATGGATTACCAAGAATCTGATATCTTACGAGTTCTTCCGGATTGCGGCCATTTCTTTCATGTCAAGTGCGTTGATCCTTGGTTCACTATGCATCTGACCTGTCCTATTTGTAGGACTTCGGTCAAGAATTTTCAAAACGTTCCCTCATCAAGCTAG 510 0.4137 MDEILYSLTLFFILILISFILSVISYCCTTTQSNTASQSSHGGVDHSINIINDTETNQTVVTTTVTVVVEPSCLVDQARVCSSSSSSSSKANINKLCDDKEDDGDNGVSSPCCCSICLMDYQESDILRVLPDCGHFFHVKCVDPWFTMHLTCPICRTSVKNFQNVPSSS 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0835 169 ProSiteProfiles Zinc finger RING-type profile. 114 156 IPR001841 -
Alju05g0835 169 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 4 160 IPR045899 -
Alju05g0835 169 SMART ring_2 114 155 IPR001841 -
Alju05g0835 169 SUPERFAMILY RING/U-box 113 162 - -
Alju05g0835 169 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 162 IPR013083 -
Alju05g0835 169 Pfam Ring finger domain 114 156 IPR001841 -
Alju05g0835 169 CDD RING-H2_PA-TM-RING 113 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0835 Alju-ChrAlju05 16996732 16997241 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0835 113 158 C3H Transcription Factor Family AT5G06490 67.391 6.29e-20 80.9