LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju05g0802	ATGCGTGGGATTTCAGTAAGAGAAGTCCATCAATTGTCAAAAGCACAGGATAGAACAATCACACGGCTGGCCTCCATCAGAGAAGTGGCTCAGCTATCAAATGCCAGGCTAGTTTTGATTAGAGATGACATAGGATTTGATGGACAAGGCTCTCACGAGCCTGTTCACTTCGCCCCTGCAAGAACATGGAAAGGAAAGGCATCTTTACCAGAATCAGAAGAAATTATATCTGATGTTGATGCATTAAAGGGGAGCTTTGATTTATTTGAGGAAGGAGGCCCAAGTTCATTTGCTGGTGCGAGTCACCCCCCTGAACCTGTTGATATGGATCTTATGAGAACAGTTTATGTACCAATAGGTCAAAACAAATCTGAGGCTGGAGGCTTAATGAAGAGCTTTTCCGTGAAGGGTTCTTCCCTAGAAGATCTCTCAATTCGTGTTCCACCTAAAAAACCAAGTCCAGCTGTTCTTTCCCCAGCAGAAAGTCTAGTTGAAGAACAAAGTGATATGAGGAACCTGCCCTCTCCAGTTTTGGGTCCTCGTACATCACAGAATACTGATCACTCTCTCCTTCCTCCAGATTCTGATGAGAAAGAATGTGTTTGGGATGCATCTTTGCCTCCAAGCGGAAATGTCAGTCCGCTTAGTAGTATTGATAGTACTGGTGTTGTCACAGCAATGAGCATTGCTAATAGTTGTGCAAGTACATACCGGAGCGATGTGCTCACTAGTGACGGCATGCTTAGTTTAGATAGGAACTTTGATAGTACTAAGGGGAGTGTGCGGGGCGATTCTCTAGAGAGTACAAAAACTAGTGCTAGTCAAGCAAGTGATAGCAGTGGGTTCAGTGATGACAGCAACTGGAGCAATGTCACTGGCAGCGCCAATAAGCCTCACAAAGGAAATGATCCTCGGTGGAAGGCTATCCTCGCCATCCGATCTCGGGATGGGATTTTGGGCATGAGTCATTTTAAGCTTCTCAAAAGACTTGGTTGTGGTGATATCGGAAGTGTATATCTCTCAGAGTTGAGTGCAACTCGGTGTTATTTTGCGATGAAAGTTATGGACAAGGCATCACTAGCAGCCAGAAAGAAGCTGACTAGGGCACAAACTGAAAGGGAGATATTGCAGCTGCTTGACCACCCATTTCTGCCAACTTTGTATACTCATTTTGAGACTGACAGATTTTCTTGTCTGGTGATGGAATACTGTCCCGGAGGTGACCTACATACCTTAAGGCAACGTCAACCTGGGAAACATTTCTCAGAGTATGCTGCTCGTTTCTATGCTGCGGAGGTTCTTTTAGCACTTGAATATCTCCACATGCTTGGAGTAGTGTATCGAGACCTTAAACCTGAAAACGTACTGGTCCGAGATGATGGTCACATTATGCTTTCAGACTTTGATCTCTCCCTTAGATGTGCTGTTTCACCAACTTTGATCAGAACATCTGATGGTGACCCTAAACGAGGTGGTGGTGCATTTTGTGTTCAGCCTGCTTGTACTGAGCCGTCATCGGTATGCATCCAGCCTGCCTGCTTCATCCCTCGGCTCTTCCCTCAGAAGAACAAGAAATCACAGAAGCCTAAAGCTGAGCTAGGGTTATCAGCCAACACGCTTCCTGAGCTTGTGGCCGAGCCCACTTCGGCTCGGTCCATGTCCTTTGTTGGAACCCACGAATACCTTGCTCCTGAAATCATCAAAGGAGAAGGTCATGGCAGCGCAGTGGATTGGTGGACATTTGGGATTTTCCTGCACGAGCTCTTATACGGTAAAACGCCTTTCAAAGGATCAGGGAACCGTGCTACATTGTTCAATGTTGTTGGTCAGCAGCTCAAATTTCCAGAGTCACCGGCCACTAGCTATGCTAGCCGGGATCTGATCCGAGGCTTGCTGGTGAAGGAACCACAGAACCGGCTAGGCGTAAAGAGAGGTGCAACTGAGATCAAGCAGCATCCCTTCTTCGAGGGTGTGAATTGGGCTTTGATTAGGTGCAGCACGCCCCCAGAAGTGCCCAGATCAGTCGAGAGCGAGATTCCCGGGGCTGTAAGATTTGGACCGCCTGATACAGTTGGCAACAATAGCAAGAGGATGGTAGGTACTGATATGAAGTCTGGTGGGGGTAAATATCTAGACTTTGAGTTCTTCTAG	2151	0.4686	MRGISVREVHQLSKAQDRTITRLASIREVAQLSNARLVLIRDDIGFDGQGSHEPVHFAPARTWKGKASLPESEEIISDVDALKGSFDLFEEGGPSSFAGASHPPEPVDMDLMRTVYVPIGQNKSEAGGLMKSFSVKGSSLEDLSIRVPPKKPSPAVLSPAESLVEEQSDMRNLPSPVLGPRTSQNTDHSLLPPDSDEKECVWDASLPPSGNVSPLSSIDSTGVVTAMSIANSCASTYRSDVLTSDGMLSLDRNFDSTKGSVRGDSLESTKTSASQASDSSGFSDDSNWSNVTGSANKPHKGNDPRWKAILAIRSRDGILGMSHFKLLKRLGCGDIGSVYLSELSATRCYFAMKVMDKASLAARKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRTSDGDPKRGGGAFCVQPACTEPSSVCIQPACFIPRLFPQKNKKSQKPKAELGLSANTLPELVAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPATSYASRDLIRGLLVKEPQNRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRSVESEIPGAVRFGPPDTVGNNSKRMVGTDMKSGGGKYLDFEFF	716

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju05g0802	716	Gene3D	Phosphorylase Kinase; domain 1	322	407	-	-
	Alju05g0802	716	Gene3D	Transferase(Phosphotransferase) domain 1	408	478	-	-
	Alju05g0802	716	SMART	serkin_6	324	655	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju05g0802	716	SUPERFAMILY	Protein kinase-like (PK-like)	306	676	IPR011009	-
	Alju05g0802	716	MobiDBLite	consensus disorder prediction	257	297	-	-
	Alju05g0802	716	ProSiteProfiles	Protein kinase domain profile.	324	655	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju05g0802	716	PANTHER	FLIPPASE KINASE 1-RELATED	102	676	-	-
	Alju05g0802	716	CDD	STKc_phototropin_like	322	673	-	-
	Alju05g0802	716	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	445	457	IPR008271	GO:0004672\|GO:0006468
	Alju05g0802	716	FunFam	serine/threonine-protein kinase D6PK-like	408	475	-	-
	Alju05g0802	716	MobiDBLite	consensus disorder prediction	145	216	-	-
	Alju05g0802	716	FunFam	Serine/threonine-protein kinase D6PK-like	322	407	-	-
	Alju05g0802	716	Gene3D	Transferase(Phosphotransferase) domain 1	550	673	-	-
	Alju05g0802	716	Pfam	Protein kinase domain	325	474	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju05g0802	716	Pfam	Protein kinase domain	552	655	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju05g0802	716	FunFam	serine/threonine-protein kinase D6PK-like	550	673	-	-
	Alju05g0802	716	MobiDBLite	consensus disorder prediction	257	301	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju05g0802	Alju-ChrAlju05	15792855	15795779	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju05g0802	27	716	AGC Kinase Gene Family	AT2G44830	70.851	0.0	941

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Alju05g0802		Pkinase	1.3e-36	CL0016

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Alju05g0802	05	15792855	15795779	Alju05g0802	05	15792855	15795779	ECH