Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0794 ATGATTCCTAATCATTCTCCTTCCCAATCAGTTCAACAATACTTCATTGAAGATGATCCTTCCTTTATGGACCTCATGAATGATGGATTCTTCTTCACTGGCAACCCTACTTCGCCGGAGCAGGGTGTTAGTAGCTCCACTGGCGCATCGTTTTCCGGCGAGAATAATGATAACAACGCAGTGAGACCAGGTGGTAATGACACAGGATCTGTGGCGAGTGAAGGGAACGCGCCATCTAGATGGAGGAATTACCGTGGCGTGAGGCGGCGGCCGTGGGGGAAGTTCGCGGCGGAGATCCGGGACCCGAAGAGGAACGGTGCGAGGACGTGGCTGGGAACTTATGAGAAGGAAGAGGATGCAGCTTTGGCTTATGATAGAGCTGCTTTCCAGATGCATGGTAGAAAAGCCAAGCTCAATTTTCCACACCTCATCGGATCGGAACAACCACTGCCGGAGCCGCCAAGAGTAGTGGTGGCTAGACACAAGCAGCGCGGCTCGCCGGAACCGTCATCGCCGTCAAAAAGTACATCTGAGGATGATGGATCTCAAGGGTCAAGTAGGAAGAAGGGCCTCACTGGACTATTGAACAAGTTAGCAACAAATAGAAGCCACGTCAGAATGGGTTGA 627 0.5167 MIPNHSPSQSVQQYFIEDDPSFMDLMNDGFFFTGNPTSPEQGVSSSTGASFSGENNDNNAVRPGGNDTGSVASEGNAPSRWRNYRGVRRRPWGKFAAEIRDPKRNGARTWLGTYEKEEDAALAYDRAAFQMHGRKAKLNFPHLIGSEQPLPEPPRVVVARHKQRGSPEPSSPSKSTSEDDGSQGSSRKKGLTGLLNKLATNRSHVRMG 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0794 208 PANTHER DNA-BINDING DOMAIN 57 180 IPR044808 GO:0003700|GO:0009873
Alju05g0794 208 PRINTS Ethylene responsive element binding protein signature 123 143 IPR001471 GO:0003700|GO:0006355
Alju05g0794 208 PRINTS Ethylene responsive element binding protein signature 84 95 IPR001471 GO:0003700|GO:0006355
Alju05g0794 208 SUPERFAMILY DNA-binding domain 83 142 IPR016177 GO:0003677
Alju05g0794 208 MobiDBLite consensus disorder prediction 33 78 - -
Alju05g0794 208 ProSiteProfiles AP2/ERF domain profile. 83 141 IPR001471 GO:0003700|GO:0006355
Alju05g0794 208 MobiDBLite consensus disorder prediction 166 190 - -
Alju05g0794 208 MobiDBLite consensus disorder prediction 145 208 - -
Alju05g0794 208 Gene3D AP2/ERF domain 82 142 IPR036955 GO:0003700|GO:0006355
Alju05g0794 208 Pfam AP2 domain 83 133 IPR001471 GO:0003700|GO:0006355
Alju05g0794 208 CDD AP2 83 143 IPR001471 GO:0003700|GO:0006355
Alju05g0794 208 SMART rav1_2 83 147 IPR001471 GO:0003700|GO:0006355
Alju05g0794 208 FunFam Ethylene-responsive transcription factor 2 82 142 - -
Alju05g0794 208 MobiDBLite consensus disorder prediction 33 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0794 Alju-ChrAlju05 15643944 15644570 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0794 84 178 AP2-EREBP Transcription Factor Family AT2G44840 70.526 1.04e-38 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju05g0794 AP2 7.5e-13 CL0081