Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0786 ATGGAGGAGCTACCGGGCATGAGGAGGTGGCCATGGGGGAAGTTAGCGGCAGAGATCTGGGATCCGAAGAGGAACAGGGAGAGGATATGGTTGGGAACTTATGAGAGGGAAGAGGATGCAGCTTTGGCTTATGATAGAGCTGCTTTCAAGATGCGTGGTTGTAAATCCAAGCTCAATTTTCCACATCTCATTGGCTCGGAACCATTACCGGAGCCGGCAAGAGTAGTCTCCGGACAAGAGCGGCGGCACTCACCGGAGTCTTCATGGCCTTCAAGGAATATATGTAAGGATGATGGATGTCAAGGGTCAAGTAAGAGGAGGAACCTGGTTGGTCTATTGAATAAGTTAGCAACAAATGGAAATCTAAGCCGGAAGCTTGAAATGGTATTCATGAAGGCATAG 402 0.49 MEELPGMRRWPWGKLAAEIWDPKRNRERIWLGTYEREEDAALAYDRAAFKMRGCKSKLNFPHLIGSEPLPEPARVVSGQERRHSPESSWPSRNICKDDGCQGSSKRRNLVGLLNKLATNGNLSRKLEMVFMKA 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0786 133 SMART rav1_2 6 67 IPR001471 GO:0003700|GO:0006355
Alju05g0786 133 MobiDBLite consensus disorder prediction 66 100 - -
Alju05g0786 133 PRINTS Ethylene responsive element binding protein signature 43 63 IPR001471 GO:0003700|GO:0006355
Alju05g0786 133 PRINTS Ethylene responsive element binding protein signature 4 15 IPR001471 GO:0003700|GO:0006355
Alju05g0786 133 Pfam AP2 domain 6 53 IPR001471 GO:0003700|GO:0006355
Alju05g0786 133 SUPERFAMILY DNA-binding domain 5 62 IPR016177 GO:0003677
Alju05g0786 133 Gene3D AP2/ERF domain 5 62 IPR036955 GO:0003700|GO:0006355
Alju05g0786 133 PANTHER DNA-BINDING DOMAIN 5 87 IPR044808 GO:0003700|GO:0009873
Alju05g0786 133 CDD AP2 6 63 IPR001471 GO:0003700|GO:0006355
Alju05g0786 133 ProSiteProfiles AP2/ERF domain profile. 3 61 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0786 Alju-ChrAlju05 15438714 15439115 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0786 6 88 AP2-EREBP Transcription Factor Family AT2G44840 66.265 7.28e-31 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju05g0786 AP2 4.5e-08 CL0081