Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0781 ATGGACCTCATGAATGATGGATTCTTCTTCACGGCAACCCTACTTCGCCGGAGCAGGGTGTTAGTAGATCCACTGGCGCAGCGTTTTCCGGCGAGAATAATGATAACAGCGCTGTATGTGAGACCAGGTGGTAATGACACAGGATCTGTGGCGAGTGAAGGGAACGCGCCATCGAGATGGAGGAATTACCGAGGCATGAGGCGGCGGCCGCGGGGGAAGTTCGTGGCAGAGATCCGGGACCCGAAGAGGAACGGTGCGAGGACGTGGCTCGGAACTTATGAGAGGGAAGAGGATGCAGCTTTGGCTTATGATAGAGCTGCTTTCAAGATGCGTTCCCTTCACTCGCCACAGATCCTGAGATCAACTGTTGTTGGTGAGAGAAAGACAAAAGAAATGTGA 399 0.5338 MDLMNDGFFFTATLLRRSRVLVDPLAQRFPARIMITALYVRPGGNDTGSVASEGNAPSRWRNYRGMRRRPRGKFVAEIRDPKRNGARTWLGTYEREEDAALAYDRAAFKMRSLHSPQILRSTVVGERKTKEM 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0781 132 Gene3D AP2/ERF domain 61 117 IPR036955 GO:0003700|GO:0006355
Alju05g0781 132 ProSiteProfiles AP2/ERF domain profile. 62 122 IPR001471 GO:0003700|GO:0006355
Alju05g0781 132 CDD AP2 62 111 IPR001471 GO:0003700|GO:0006355
Alju05g0781 132 PRINTS Ethylene responsive element binding protein signature 86 102 IPR001471 GO:0003700|GO:0006355
Alju05g0781 132 PRINTS Ethylene responsive element binding protein signature 63 74 IPR001471 GO:0003700|GO:0006355
Alju05g0781 132 Pfam AP2 domain 62 112 IPR001471 GO:0003700|GO:0006355
Alju05g0781 132 SUPERFAMILY DNA-binding domain 62 113 IPR016177 GO:0003677
Alju05g0781 132 SMART rav1_2 62 122 IPR001471 GO:0003700|GO:0006355
Alju05g0781 132 PANTHER DNA-BINDING DOMAIN 49 111 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0781 Alju-ChrAlju05 15182318 15186153 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0781 51 122 AP2-EREBP Transcription Factor Family AT2G44840 59.740 3.48e-23 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju05g0781 AP2 2.4e-11 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju05g0781 05 15182318 15186153 Alju05g0781 05 15182318 15186153 ECH