Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0780 ATGATCCCTAATCATCTTTCTCCTTTAGATTCAGTTCAACAATACCTTCTTCAAGATGATCCTTCCTCTATGATTCTCATGAATGTCTTCTTCACGTCTAATAATAACCCTACTTTTAGCCCTAGCTCCGATGTTTCCTCGCCAGAGCAGGGTGGTAGTAGCTCCAGTGGCACGGTGTTTCCCGGTGAGCATAACAACGCCATGAAACCTCCTGCAGCTGATAGTAATAATGCAGGATCTGTGGTGCGTGAACTGAACGCGCCACCAAGATGGAGGAGCTACCGGGGCGTGAGGCGGCGTCCGTGGGGGAAGTTCGCAGCGGAGATCCGGGATCCGAAGAGGAACGGAGCGAGGATATGGTTGGGAACTTATGAGAGGGAAGAGGATGCTGCTTTGGCTTATGATAGAGCTGCTTTCAAGATGCGTGGTCGTAAAGCCAAGCTCAATTTTCCACATCTCATTGGCTCGGAACCATTACCGGAGCCGGCAAGAGTAGTTGCCGGACAGAAGCGGCGGCACTCGCCAGAGTCTTCATGGCCTTCAAGGAATATATGTAAGGATGATGGATGTCAAGGGTCAAGTAAGAGGAAGAACCTGGTTGGTCTATTGAATAAGTTAGCAACAAATGGAAATCTAAGCCGGAAGCTTGAAATGGTATTCATGAAGGCATAG 672 0.4896 MIPNHLSPLDSVQQYLLQDDPSSMILMNVFFTSNNNPTFSPSSDVSSPEQGGSSSSGTVFPGEHNNAMKPPAADSNNAGSVVRELNAPPRWRSYRGVRRRPWGKFAAEIRDPKRNGARIWLGTYEREEDAALAYDRAAFKMRGRKAKLNFPHLIGSEPLPEPARVVAGQKRRHSPESSWPSRNICKDDGCQGSSKRKNLVGLLNKLATNGNLSRKLEMVFMKA 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0780 223 CDD AP2 94 153 IPR001471 GO:0003700|GO:0006355
Alju05g0780 223 Gene3D AP2/ERF domain 93 152 IPR036955 GO:0003700|GO:0006355
Alju05g0780 223 MobiDBLite consensus disorder prediction 39 80 - -
Alju05g0780 223 PANTHER DNA-BINDING DOMAIN 54 177 IPR044808 GO:0003700|GO:0009873
Alju05g0780 223 SMART rav1_2 93 157 IPR001471 GO:0003700|GO:0006355
Alju05g0780 223 MobiDBLite consensus disorder prediction 39 62 - -
Alju05g0780 223 FunFam Ethylene-responsive transcription factor 2 92 152 - -
Alju05g0780 223 SUPERFAMILY DNA-binding domain 94 152 IPR016177 GO:0003677
Alju05g0780 223 PRINTS Ethylene responsive element binding protein signature 94 105 IPR001471 GO:0003700|GO:0006355
Alju05g0780 223 PRINTS Ethylene responsive element binding protein signature 133 153 IPR001471 GO:0003700|GO:0006355
Alju05g0780 223 ProSiteProfiles AP2/ERF domain profile. 93 151 IPR001471 GO:0003700|GO:0006355
Alju05g0780 223 Pfam AP2 domain 94 143 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0780 Alju-ChrAlju05 15153045 15153716 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0780 61 178 AP2-EREBP Transcription Factor Family AT2G44840 60.833 2.55e-38 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju05g0780 AP2 1.9e-13 CL0081