Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0775 ATGGCCTTTTCTCCTTCACCATCATCAAGCCCCATTAATCCTTCGCCATCAAACGAAGAACGCCGTCGTTACGATGTCTTCTTAACGTACCAAGCCAAATGCCAAGCCATAGTTTCTCTTGAAACCTCTTTAAGGGATGCTTCAATCAAGACATACATTGACCAAGATGAGCCAATCTCACCTGCCGTGTTGAGAGCCATCGAACTTTCAAGAATAGTTATCTTTGTTTTCACAAAACACTTCGGTTCGTCCAGATATTGCTTGGATAAACTGGATATAATCATTAATTATCACAAAAACATGGGAAAGAAAGTGTTTCCTGTGTTTTGTGGTGTGAACTTGACAGGTGTACGTCAGGAGATGGGAAGTATTGCAGAGTTAATGAGCAGAGGAGATTTGCAGAAACAAGAGTTTTTCAAATGGAGAAGCGCCTTTGCTGAAGCTACTTCTCTTTCCAGATGTACAATCTCAGCCAAGTGTTCCAGATATAGCAAAAGAATCAGAGAAATCACTCACTCTATCAAGATATTTCTTGATTCAACATACTTGGATGTCCCACCACATCTGGTACCAATACAACATCGGATGAAAGAAGTCCTTCATTTGTCCAAATACTACTCACAAGATATCAATGTGAGGAAAGAAGAAGTGATCATAGTGGGCATATGTGGAGTTGTAGGCATTGGCAAATCAACCATTGCTCGAATGATTTATGATGCAATCAGTGTCAATTTTGAGAGCAAAAGCTTTGTGGCAAGTATCAAGAAAGTGTGGGACAAAGACAAAGGTCAAGTTCTTCTCCAAGAACAACTTATTTCAGATATTACTGGGACAAAAGATTTGAAGAAATATGACACTGAAACAGGCATCCAACAAATAAAGATGGCTCTAAAGAATAGAAGGGCACTTGTAGTGCTTGATGATGTTGATCATATAGAACAACTTATGACATTAACTGAAGCTGAGTTGATCGGCCTTGTTATTGACACTGTCACCAAGAACCTATATGACAACACAAATTTGTTTGTCACAAATCATCCTGTGGGGCTAACATCTCGCATGAAGGAAATCACCCAAATGTTAAGTGACCAATCAAATGAGATCAAGGTGGTTGGGATTCTTGGAATGGGGGCCAAGCATGGAGGAATTGTCAGTTGTTGGACAAGTTGA 1170 0.3983 MAFSPSPSSSPINPSPSNEERRRYDVFLTYQAKCQAIVSLETSLRDASIKTYIDQDEPISPAVLRAIELSRIVIFVFTKHFGSSRYCLDKLDIIINYHKNMGKKVFPVFCGVNLTGVRQEMGSIAELMSRGDLQKQEFFKWRSAFAEATSLSRCTISAKCSRYSKRIREITHSIKIFLDSTYLDVPPHLVPIQHRMKEVLHLSKYYSQDINVRKEEVIIVGICGVVGIGKSTIARMIYDAISVNFESKSFVASIKKVWDKDKGQVLLQEQLISDITGTKDLKKYDTETGIQQIKMALKNRRALVVLDDVDHIEQLMTLTEAELIGLVIDTVTKNLYDNTNLFVTNHPVGLTSRMKEITQMLSDQSNEIKVVGILGMGAKHGGIVSCWTS 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0775 389 Gene3D - 17 179 IPR035897 -
Alju05g0775 389 Pfam NB-ARC domain 216 315 IPR002182 GO:0043531
Alju05g0775 389 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 148 IPR035897 -
Alju05g0775 389 Pfam TIR domain 24 174 IPR000157 GO:0007165
Alju05g0775 389 MobiDBLite consensus disorder prediction 1 20 - -
Alju05g0775 389 ProSiteProfiles TIR domain profile. 22 171 IPR000157 GO:0007165
Alju05g0775 389 MobiDBLite consensus disorder prediction 1 17 - -
Alju05g0775 389 PRINTS Disease resistance protein signature 296 310 - -
Alju05g0775 389 PRINTS Disease resistance protein signature 219 234 - -
Alju05g0775 389 SMART till_3 23 151 IPR000157 GO:0007165
Alju05g0775 389 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 318 IPR027417 -
Alju05g0775 389 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 46 318 IPR044974 GO:0006952
Alju05g0775 389 Gene3D - 180 341 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0775 Alju-ChrAlju05 15053082 15060188 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0775 210 309 WRKY Transcription Factor Family AT5G45050 34.000 2.83e-10 60.5