Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0766 ATGGCTTTTTCTCCGTCACCATCCTCAAGCCCCATTAATCCTTCACCATCAAGCGAAGAACGTCGCCGTTTCGATGTCTTCTTAACATACCAAACCAAATGCCAAACCATAGTTTCTCTTGAAACCTCTTTAAGGGATGCTTCAATCAGAACATACATCGACCAAGATGAGCCAATCTCACCTGCCGTGTTGAGAGCCATCGAACTTTCAAGAATAGTTATCTTTGTTTTCACAAAACACTTCGGTTCGTCCAGATATTGCTTGGATAAACTGGACGTAATCATTAGTTATCACAAAAACATGGGAAAGAAGGTGTTTCCTGTGTTTTGTGGTGTGAGTTTGACAGGTGTACGTCAGGAGATGGGAAGTATTGCAGAGTTAATGAGCAGAGGAGATTTGCAGAAACAAGAGTTTTTCAAATGGAGAAGCGCCTTTGCTGAAGCTACTTCTCTTTCCAGATGTACAATCTCAGCCAAGTGTTCCAGATATAGCAAAAGAGTAAGAGAAATCACTCACACCATTAAGATATTTCTTGATTCAACATACTTGGATGTCCCACCACATCTGGTACCAATACAACATCGGATGAAAGAAGCGCTTCATCTGTCCAAATACTACTCACAAGATATCACTGTGAGGGAAGAAGAAGTGATCATAGTGGGCATATGTGGAGTTGTAGGCATTGGCAAATCAACCATTGCTCGAATGATTTATGATACAATCAGTGTCAATTTTGAGAGCAGAAGCTTTGTGGCAAGTATCAAGAAAGTGTGGGACAAAGACAAAGGTCAAGTTCTTCTCCAAGAACAACTTATTTCAGATATTACTGGGACAAAAGATTTGAAGATACACGACACTGAAACAGGCATCCAACAAATAAAGATGGCTCTACAGAATAGAAGGGCACTTGTAGTACTTGATGATGTTGATCATATAGAACAACTTGTGACATTAACTGAAGCTGAGTTGATCGGCCTTGTTATTGACACAGTCACCAAGAACCTATATGACAACACAAATTTGTTTGTCACAAATCATCCTGTGGGGCTAACATCTCGCATGAAGGAAATCACCCAAATGTTAAGTGACCAATCAAATGAGATCAAGGTAGTAGAATAA 1119 0.4004 MAFSPSPSSSPINPSPSSEERRRFDVFLTYQTKCQTIVSLETSLRDASIRTYIDQDEPISPAVLRAIELSRIVIFVFTKHFGSSRYCLDKLDVIISYHKNMGKKVFPVFCGVSLTGVRQEMGSIAELMSRGDLQKQEFFKWRSAFAEATSLSRCTISAKCSRYSKRVREITHTIKIFLDSTYLDVPPHLVPIQHRMKEALHLSKYYSQDITVREEEVIIVGICGVVGIGKSTIARMIYDTISVNFESRSFVASIKKVWDKDKGQVLLQEQLISDITGTKDLKIHDTETGIQQIKMALQNRRALVVLDDVDHIEQLVTLTEAELIGLVIDTVTKNLYDNTNLFVTNHPVGLTSRMKEITQMLSDQSNEIKVVE 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0766 372 Gene3D - 17 179 IPR035897 -
Alju05g0766 372 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 42 322 IPR044974 GO:0006952
Alju05g0766 372 Gene3D - 181 370 IPR027417 -
Alju05g0766 372 PRINTS Disease resistance protein signature 296 310 - -
Alju05g0766 372 PRINTS Disease resistance protein signature 219 234 - -
Alju05g0766 372 MobiDBLite consensus disorder prediction 1 20 - -
Alju05g0766 372 Pfam TIR domain 24 174 IPR000157 GO:0007165
Alju05g0766 372 MobiDBLite consensus disorder prediction 1 17 - -
Alju05g0766 372 ProSiteProfiles TIR domain profile. 22 171 IPR000157 GO:0007165
Alju05g0766 372 SMART till_3 23 151 IPR000157 GO:0007165
Alju05g0766 372 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 341 IPR027417 -
Alju05g0766 372 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 148 IPR035897 -
Alju05g0766 372 Pfam NB-ARC domain 214 315 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0766 Alju-ChrAlju05 14778728 14789318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0766 13 310 WRKY Transcription Factor Family AT4G12020 25.574 3.36e-10 60.1