Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0731 ATGCATTCGAGCCAGTTCGACGGCGCCACAGCCTTCTCCGGCGGTGGTTTCATGCCGTCTCAGGCAACTCAAGGCCCTGAATCTTCCTTCTCCTACTCTAAGAATCGTGATGCTCAATCATTGCTTCCTCTGACGGTCAAGCAGATAAATGACGCATTTCTGTCAAGTGATGATAAGTCTAACATGGTTATTGATGGCGTGGATGTTAATAATGTCACTCTTGTTGGAAGGGTGTGCAACAAAGCTGGAAGGATTACTGATGTTACTTTTGTACTAGATGATGGGACTGGAAGGATTGAGTGTAGTAAATGGCTCCAAGAAGATGTAGACACCAATGAAGCGGATGTTATCAGGGATGGAATGTATGTGCGCTTACATGGACACTTGAAAGGTTTTCAGGGAAAAAGGACCTTAAATGTATTCTCGTTTAGGCCTTTGAACGACTTCAACGAGATTGCAAGTCACTTCATTGATTGTATATACGTCCATCTCTATAATACCAGGATACGGACTAGAGTGCCGAATCAGCAATCTATGAACAATTCCTTACCTATTAATCCCACAAGAGGTCATCAAGCTGTCCCTCCAAGTCAATTCTCTGGTCAGCACAACAATGGTCAGAAGAGTGTTGAAGATATGGTCTTAGATATCTTGCATCTTCCCTCGAACAGAGCAAAAGAGGAGGGTGTCTCTCGGGATCTTATTGCACAGCATCTTGGAATTCCTTTGGATAAGCTCATGTTATCCATAAAAAACCTTATTGAGGAAGGCGCCATTTATGAAGCTATATCTGATCATTACAAGTCAATCATCAATGGTTGA 822 0.4282 MHSSQFDGATAFSGGGFMPSQATQGPESSFSYSKNRDAQSLLPLTVKQINDAFLSSDDKSNMVIDGVDVNNVTLVGRVCNKAGRITDVTFVLDDGTGRIECSKWLQEDVDTNEADVIRDGMYVRLHGHLKGFQGKRTLNVFSFRPLNDFNEIASHFIDCIYVHLYNTRIRTRVPNQQSMNNSLPINPTRGHQAVPPSQFSGQHNNGQKSVEDMVLDILHLPSNRAKEEGVSRDLIAQHLGIPLDKLMLSIKNLIEEGAIYEAISDHYKSIING 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0731 273 Pfam OB-fold nucleic acid binding domain 72 144 IPR004365 GO:0003676
Alju05g0731 273 Gene3D - 202 271 IPR036388 -
Alju05g0731 273 PANTHER REPLICATION PROTEIN A-RELATED 5 270 IPR040260 -
Alju05g0731 273 FunFam replication protein A 32 kDa subunit A-like 34 168 - -
Alju05g0731 273 MobiDBLite consensus disorder prediction 184 205 - -
Alju05g0731 273 Gene3D - 37 169 IPR012340 -
Alju05g0731 273 SUPERFAMILY Nucleic acid-binding proteins 41 168 IPR012340 -
Alju05g0731 273 CDD RPA2_DBD_D 71 164 - -
Alju05g0731 273 PIRSF RPA32 1 271 IPR014646 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Alju05g0731 273 Pfam Replication protein A C terminal 163 265 IPR014892 -
Alju05g0731 273 SUPERFAMILY "Winged helix" DNA-binding domain 205 270 IPR036390 -
Alju05g0731 273 MobiDBLite consensus disorder prediction 12 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0731 Alju-ChrAlju05 13333964 13338672 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0731 3 270 Core DNA Replication Machinery Family AT2G24490 46.350 3.37e-79 239