Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0706 ATGGAATTTCGTAGAGCATATGACCAGGTAGTTTTTCCCATATTCTATGGTGTGAATCGGTCTGCAGTTCGTAATCAAAAATCTAGTTTTGGAAAAGCATTTGGAGATCTTATACAAAGAATTTCACCCGCTGAATATGAAGTGTCAAGGTGGAGAACAGCTCTCAATGAAGCTGGGGGAAATTATGGGTTTGTTGTGCCTAATTTGAAGTCCAACAATGAAAGTGATATTATTCAGAATGTTGTCGAGCATGTTCGTCAAATATTGAGCAGGAAAGGCTTGTTTGTCAAAGATGGCCTAGTTGGAGTGAGTTCTCAAGTGAAAGAAGTGGTTACAATGCTTCAAAACTATAAATCAAAGGATGTTGTCTCCATAGGGATATGGGGAATGGGGGGTATTGGCAAAACAACTCTTGCCAGACTCATTTATCACTATATTGCATATGAATTCGAGAGTACATGCTTTCTTTCAAATGTGAGGGAAGAATGGGAAAGCTGGGAAGGCGAATTTGATTTACAAAGAAAACTTCTTTCGGCAATATGTGGAGAAACAGATATAGGAACACATAACATTCAATCAGTATGTCTCAACTTGAAGGAAAGACCTAGTCATACGAAGGTACTTGTTGTGGTTGATGATGTGAATTACTTGGAGCAACTATATGCTTTATGTGAGAGTCCTGAATGGTTTGGTAAAGGGAGTAGAATAATCTTCACAACTAGAGATTTACATCTGCTCAAAGCCTTTCAAGTGGATGATGTATACAACATGAAACTTCTGAGTGATCATGAGTCTTTTCAGCTTTTCAGTGGAAAAGCATTTAAACAAGCAAGTCCTGAAGGAGAATTCATCGAACTTTGCAGAAGAGTGGTTGCTTATTCTGAGGGACTACCCTTAGCTCTTAAGGTCCTTGGCTCTATTATGTCACGTATGGAATGGGAGTCGGCAATGCTGAAACTAAGCACAGTTCTCCCAAGTGAGTTATACCAAACACTAAAGCTTAGCTTTGACTCTTTAGATGGTAATCAAAAAGAAATATTTCTAAATGTAGTTTTATTTTATATTGGGGAGGATATACATAATGTGATACAAAAGTTTGATGGCCTTGGATGTGATGCTAGCATTGGTATAAGAGTCTTAGTGGATCGAAGCCTTGTAACCATTGACAAGAACAAAAAAATTAGAATGCATAATGTGTTGCAAGTCATGGGAAGACAAATAATGCGTGAAAGTTCACAAAATGAGCTTCAAAACCTAGGTCATAGGTATGAGGTGTTCTTGAGTTTTAGAGGTGAAGACACTCGGTCAACTTTTACTTCACATCTCTATAGTGCTCTCTGTAATGCTGGCATTATTGTTTTCAAAGATGATGTTGAGCTTCCAAGAGGAAAACATATCAAAACGGAACTATTGCAAGCAATTGGTAGTTCAAAAATTGCTATCATCATCTTCTCTAGGGAATACGCTGCATCTAAATGGTGTTTGGAGGAATTGTCAATCATTATGGAGCTTCATAAATCAAATGATCAGGTGGTTCTACCTGTGTTTTACCATGTTGATCCATCAGAAATTCGTAATCAAACTTTTAGTTTTGGAGAAGCATTTAAAGATCTTATACAAAGAATTTCGCCACCAGAACACCAAGTTTCCAACTGGAGGATAGCCCTTGATGAGGCTGGGGGCCTTGCTGGAACCGTTGTATTTGGTTCTAGGGACGAGAGTGACTATGTGAAAGCTATTGTTGAGAGTGTTTGTCATATATTGGACAAGAAAGACTTGTTTGTCGCTGACCATCCAGTAGGAGTGGATGAGCGAGTGCAAGAAGTGATCGCAACGCTCCAAAACCATCAATATGAAGATGTTATCATGGTAGGAATATGGGGAATGGGTGGCATAGGCAAAACAACAATTGCCAAAGCCATTTATAATGAAATTGGTCACACATTTGATAGTAGAAGTTACCTTTCAAAGATCAGAAAAGTTTGGGACCAAAAAAGGGGCAAAGTTCGCTTACAAAACCAGCTTCTTTCTGAAATATGTAAGACATCAAAAATGAAGATCAATGACATTGAATCAGGAAAAGTCAAATTGAAGGATAGACTTTGCCATAAAAAGGCACTGGTTGTGCTTGACGATGTAGATAAACTGGCCCAATTGAAAGCTTTAGTTGGAAGTCGTGATTGGTTTAAACCAGGAAGTGCAATAATCATCACAACTAGAAATAGAGGTCTACTCCTTAATATGGAATGTCATGTTTATTTGATGAAGAATTTGGATATACAGGAATCCATTGAGCTTTTTTGTTGGCATGCATTTAAAAAAGGAAGTCCTAAAGAAGATTTCGCTAACCTTTCAAGAAACATAGTTGCATACTCTGGGGGACTTCCATTAGCTCTTGAAATCCTTGGCTCCTATTTATTTGATAGAGAAATGAATGAGTGGAGGAGAGTATTGAAGAAACTTAAAAAAATTCCCAATAACAAGATACAAAAGAAACTACAAATAAGCTTTGATGGTTTAGATGATTTGGAGAAAGAAATATTCCTTGATATATCTTGCTTCTTTATTGGGATGGACAGAAATGAAGTCACACAGATATTAAATGGCTGTGATTTTTTTGCTGACATTGGAATCAAAACCCTTGTAGATCGAAGCCTTGTAACCATTGATGAGAAGAATAAGCTTAGTATGCATGATTTGGTGCGGGACATGGGAAGAGAAATAATCCGTAAACAATCTCAAAAGGAGCCCGGGAAGAGAAGTAGGTTATGGTTTCATAAGGATGCACGAGTTGTATTACAAAAACAGATGGGGACAAAGGCTATTGAAGGACTATCTTTAAAGTTGTCACAAAGTGAAAAAATGCAATTTCAGACAGAAGCATTCAAGAAGATGAAGAGACTCAGATTACTTTGTCTTGACAATGTAGAACTCAAAGGAGACTACAAATGCATCAGTAGAAGTAGAGATCAGCTCAGATGGCTTTGCTGGCAACGCTTTCCCAAAAAATACATTCCGAGAAAGTTTTATCAGGAGGGATTAGTTGCCATTGACTTAAAATACAGCAACCTTAGACAAGTGTGGAAAGAAACCCAGTTATTGAAGAAGCTGAAAATCCTCAATCTCAGCCACTCTCTTAACTTGGTGCAAACTCCTAATTTTTCAAATCTACCGAATCTTGAAATATTTGGAGGATTGTACTGGCCTTCATAG 3213 0.3769 MEFRRAYDQVVFPIFYGVNRSAVRNQKSSFGKAFGDLIQRISPAEYEVSRWRTALNEAGGNYGFVVPNLKSNNESDIIQNVVEHVRQILSRKGLFVKDGLVGVSSQVKEVVTMLQNYKSKDVVSIGIWGMGGIGKTTLARLIYHYIAYEFESTCFLSNVREEWESWEGEFDLQRKLLSAICGETDIGTHNIQSVCLNLKERPSHTKVLVVVDDVNYLEQLYALCESPEWFGKGSRIIFTTRDLHLLKAFQVDDVYNMKLLSDHESFQLFSGKAFKQASPEGEFIELCRRVVAYSEGLPLALKVLGSIMSRMEWESAMLKLSTVLPSELYQTLKLSFDSLDGNQKEIFLNVVLFYIGEDIHNVIQKFDGLGCDASIGIRVLVDRSLVTIDKNKKIRMHNVLQVMGRQIMRESSQNELQNLGHRYEVFLSFRGEDTRSTFTSHLYSALCNAGIIVFKDDVELPRGKHIKTELLQAIGSSKIAIIIFSREYAASKWCLEELSIIMELHKSNDQVVLPVFYHVDPSEIRNQTFSFGEAFKDLIQRISPPEHQVSNWRIALDEAGGLAGTVVFGSRDESDYVKAIVESVCHILDKKDLFVADHPVGVDERVQEVIATLQNHQYEDVIMVGIWGMGGIGKTTIAKAIYNEIGHTFDSRSYLSKIRKVWDQKRGKVRLQNQLLSEICKTSKMKINDIESGKVKLKDRLCHKKALVVLDDVDKLAQLKALVGSRDWFKPGSAIIITTRNRGLLLNMECHVYLMKNLDIQESIELFCWHAFKKGSPKEDFANLSRNIVAYSGGLPLALEILGSYLFDREMNEWRRVLKKLKKIPNNKIQKKLQISFDGLDDLEKEIFLDISCFFIGMDRNEVTQILNGCDFFADIGIKTLVDRSLVTIDEKNKLSMHDLVRDMGREIIRKQSQKEPGKRSRLWFHKDARVVLQKQMGTKAIEGLSLKLSQSEKMQFQTEAFKKMKRLRLLCLDNVELKGDYKCISRSRDQLRWLCWQRFPKKYIPRKFYQEGLVAIDLKYSNLRQVWKETQLLKKLKILNLSHSLNLVQTPNFSNLPNLEIFGGLYWPS 1070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0706 1070 Pfam TIR domain 6 92 IPR000157 GO:0007165
Alju05g0706 1070 Pfam TIR domain 423 584 IPR000157 GO:0007165
Alju05g0706 1070 SMART till_3 422 562 IPR000157 GO:0007165
Alju05g0706 1070 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 94 348 IPR027417 -
Alju05g0706 1070 Gene3D - 420 590 IPR035897 -
Alju05g0706 1070 ProSiteProfiles TIR domain profile. 1 89 IPR000157 GO:0007165
Alju05g0706 1070 SUPERFAMILY "Winged helix" DNA-binding domain 327 412 IPR036390 -
Alju05g0706 1070 PRINTS Disease resistance protein signature 700 714 - -
Alju05g0706 1070 PRINTS Disease resistance protein signature 1032 1048 - -
Alju05g0706 1070 PRINTS Disease resistance protein signature 623 638 - -
Alju05g0706 1070 PRINTS Disease resistance protein signature 792 806 - -
Alju05g0706 1070 Gene3D - 591 756 IPR027417 -
Alju05g0706 1070 Gene3D - 88 254 IPR027417 -
Alju05g0706 1070 Gene3D - 1 87 IPR035897 -
Alju05g0706 1070 Gene3D - 757 841 IPR042197 -
Alju05g0706 1070 Gene3D - 259 340 IPR042197 -
Alju05g0706 1070 FunFam Disease resistance protein (TIR-NBS-LRR class) 420 590 - -
Alju05g0706 1070 SUPERFAMILY L domain-like 897 1062 - -
Alju05g0706 1070 ProSiteProfiles TIR domain profile. 421 588 IPR000157 GO:0007165
Alju05g0706 1070 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 594 851 IPR027417 -
Alju05g0706 1070 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 423 1062 IPR044974 GO:0006952
Alju05g0706 1070 SUPERFAMILY Toll/Interleukin receptor TIR domain 414 564 IPR035897 -
Alju05g0706 1070 SUPERFAMILY "Winged helix" DNA-binding domain 827 933 IPR036390 -
Alju05g0706 1070 Gene3D Ribonuclease Inhibitor 882 1063 IPR032675 -
Alju05g0706 1070 Pfam NB-ARC domain 106 335 IPR002182 GO:0043531
Alju05g0706 1070 Pfam NB-ARC domain 604 831 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0706 Alju-ChrAlju05 12763315 12768971 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0706 1 414 WRKY Transcription Factor Family AT4G12020 29.904 4.36e-41 163