Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0692 ATGAGTATTGAAAGGGTTGCGTCTCACAAAGTCTTGGATGATGTTGATCGATTGGGCAGAAAGCAGAAGGCAGCCAATACTGACCTTATGGCAAGATTAGATGAATGCTTGTTTTGCAATCTTCCAAGTCATGCAATAGGTTTGGAGCTTCGTACAAAAGAAGTGCTTCGCTTAATAGAGTGGGGAAACCCTCATATGAAGGATATGCTCATTATAGGAATCTGGGGTGTTGGAGGCATCGGTAAAACTACTATTGCAAGAGCTATTTATGATAGAATTGGTGTCAATTTCGAGAGTAAAAGTTTCCTCACAGGTATCAAGGATGTATGGGAGAAACGTAATGGTAGAGTTCTTCTATGGAACCAACTTCTTTCAGATTTTTCTGAAAGTGAATTTGATGAGATAACTGATGTTGAGGTGATGCTTGAAAGAAGAAAGTCGGTACTCCATAAAAGAGCTCTAGTAGTACTTGATGATGTAAATCAAGTGGACCAAATCATTGAATTATGCAGAAACAAAGAGCAGTTTGGTGTAGGAAGCTTGATATTCATTACTACAAGAGATAGAGATATACTTGATCACATTATTGACAAATCATACGAAATGAGAAGGTTGAATAGCAATGACTCTCTTAAGCTTTTCAGCTGGCATGCATTTAAGAAATTTAATCCGACTGATGATTTTGTGGATCTTTCATGGGAAATAATTATTTTTTGTGAAGGAACACCATTGGCTCTTGAAGTTATTGGCGCTCTTCTACATAATAGAACAATATCAGAGTGGAAAAATGTGTTGAATAAATTGAAAGGAGTTCCTAATGGTCAAATACAAAAGAAGCTCAAGATTAGCTTTGACTTTCTAACCAATCTAGAGAAAGATTTATTCTTTAGTATAGCTTGTTTTTACTTGGGTCAAAGTGAAAAATGTGTTACCCATTTATTAAAAGGCTCAAGATTTCCTGTGGAAATGGTAATGCGTGTCATCATTGAGCGAAGTCTTGTTAAAGTTATAAATGGAAATCTTCATGTTCATGAATTGCTACAAATGATAGGAAGGGAAATAGGTCCTAATAAGCCAAAGCTCAAATACATTTATGATGTATTCTTGAGTTTTAGAGGTGAAGATACACGCAAATCTTTTGCTACTCATCTTTGTACTTCTATGAGACAAGCTGGTATTGAAGTTTACATGGATGAAGAACGGATTGAAAGGGGAAAAAATATTTCTTCTTCACTGCTACAAGCAATCGAATGTTCAAGAATTTCGATCATTATATTCTCAAAGAATTATGCTGGCTCAAGTTGGTGCTTGCAAGAATTAGAGAAAATCATGGAGTGTTACAAAACAACTTATCAAGAGGTTTTGCCTATATTTTATGATGTGGAACCATCTGAAGTTCGTAAACAACAAAATGCCTTCGGTAAAGCATGGAAAAGGCTTATAAGGAGACCTTCTAGTAGCAAAGGTAAGAAATTGACACTCAAGAAAGTCCTTATTGAGGCTGCCAACTTATCTGGGTGGGATATGAAGAACTTCAGAACTGAACGGGAGTTGATTGACCATGTTATTGAAGCTGTTACAATGAAGATAGATAACAAGAAAAGCTTATTTGTTGCACATCACCCTGTGGGATTGGAGTCTCGTGTGCAAGATATCATCCAATTGTTGAATAATAAATCAAATGAAGTTATCATTGCAGGGATTTGGGGGATGGGAGGGATTGGTAAGACAACAGTTTCCAAAACCATCTACAATGAAATCGGTGAAAATTTTGAGGGGAAGTGTTTCCTCGCAAACGTAAGGGAAGTTTGGAAGGGAGATAATGGTCAGGTTTATTTGCAAGAACAACTTCTGGCAGGCATCTTAAAATCAAGAAAGATGGCAATACCAAATACAGAAGTAGGAAAAACTCTAATCAAGGAATTGATATGTAAGAAAAGGGTACTTCTTGTATTGGATGATTTGAATAATGAAAACCAAATTAAAGCATTGTGTGGAAGTCGTGAATGGTTTGGCCGAGGCAGTAGAATAATTATCACGACTAGAGATCAACGGCTACTTCATATCCTTCAAGTGGATAATGTATACAATGTCAAGGAAATGAATGACAATGAATCTCTTGAGCTTTTTAGCTGGCATGCCTTTAAACAAGCTACACCTAACAGAGATTTCATTGAACTTTCAAGAAAGATAGTTTCTTACTCTAGAGGGTTGCCACTAGCACTAGAAATCCTTGGCTCCTATTTGTTTGATAGAGAGATATATTATTGGGAAAGTGTTTTGGAGAAGTTGCAACAAATTCCATGTGGCCAGATATATGAAGTTCTCAAAATAAGCTATGATGGCTTGACTGACCAAACAGAGAAGGATATATTCTTGGACATATGTTGTTTTTTCATTGGGAAGGATAGAAGCTATGCTACTCAAATATTAAATGCTTGTAATCTTTATGCAGATATTGGAATTACTCATCTAATTGAGCGAAGCCTTGTGAAAGTTGGCTACAAAAATAAGTTGGAGATGCATGACTTATTACGTGACATGGGAAGAGAAATCATTCGTGAGCAATCACAAGATGAACTTGAAAATTGTACTAGATTATGGTGTCACGATGATGTGCTGAAAGTATTGAGAAATTACACTGGAACAATGGCTACCAAGGGATTGACTTTAAAAATGTCCGGAGACAGTTCATCATCCTTAGATGCTCAAGCATTTGAGAAGATGCAGAAGCTTCGTTTGCTTCGGCTTGATTATGTACAACTTCTTGGGGACTATGGTTATCTATCGAAAGAATTGACATGGCTTTGCTGGCATGGATTTTCCTTAGAAAGCATGCCAAATAACTTAAGTCTTGAAAAGGTCATTGTCATAGACTTAAAGTGGAGCAATGTCACTAAAGTGTGGGAGAAAAGCCAGCTGTTGAAGGGATTAAAAATTCTCAATTTAAGTCATTCTCAATACTTGATAGAAACACCCAACTTTTCAAAGTTACCACATCTTGAAAAGTTAATACTCAAAGATTGTCCACTTTTGTCAACGCTTCATCCTTCTATTGGAAGTCTTAGATATATTATTTTGTTAAATTTAAAGGACTGCAAAGGCCTTAACCATCTCCCAAGAAGTATATATGACTTGAAATCTTTGCAAACTCTCAATCTTTCTGGTTGTTCAAAGATTGAAAAGTTGGAAGAAGAGATTGAGCAAATGGAATCCCTAACAACTCTAGTGGCAAATCACATTGCAATAACTCATGTGCCTGTATCATTGGTGAGGTTGAAATGCATTAAATATGTGTCACTATGTGGCTATGACGGATTAACACGTGATTTATTTCCATCTCTTCTTTTGTCTTGGATGTCCCCAATAAATCATTCAAAGTCCTTGTTCCAAGCATTTGGGATGATAGCATCATTAAGCAATAAGGGTCTATCACATCCTACGTTAGAAGGAAGACCAAGCACATCTCAATCATCACGTAGAGAAACTCATGATTTAATTGGTTTTCATGAGAGAGTCCACATGAAAACATCAGAAACATTCTTGAGTTCTCTAACTATTCGTGTCGGTGGGTTCTCCAAAGTTATTGATACACTTATACAGAGTATTTCACAGGGATGTAGTGAAAGAGGACTTGGTGGCAGTTCTCTTCCTGGAGACAATTATCCTTATTGGCTAAATTTCAAAGGTGACGGACATTCAATATTATTTGAAGTGCCTCACATTATTGGAAGAAGCTTGAAAGGATTAATTCTATGCATTATTTGCTTGTCTTCCGAAGACAACATAACATCTATGTATCCTATTGGTGTCTTGATATCAAATCAGACAAAGGCTACCATTGAATTCTACAAGAAAGATGCAGTAATTTGTTCAAAGGATGAAGAATGGCAAGACATAATTACTAATTTGGAGCCTGGAAACAAAGTGCAAGTTGTGGTAACTTTTGCAAGTCAATTAGCTGTGGATAGTACAGTCATTTATTTGATATATGATGAAGAGATTTGCCAGAGAATTATGTATTGA 4026 0.3631 MSIERVASHKVLDDVDRLGRKQKAANTDLMARLDECLFCNLPSHAIGLELRTKEVLRLIEWGNPHMKDMLIIGIWGVGGIGKTTIARAIYDRIGVNFESKSFLTGIKDVWEKRNGRVLLWNQLLSDFSESEFDEITDVEVMLERRKSVLHKRALVVLDDVNQVDQIIELCRNKEQFGVGSLIFITTRDRDILDHIIDKSYEMRRLNSNDSLKLFSWHAFKKFNPTDDFVDLSWEIIIFCEGTPLALEVIGALLHNRTISEWKNVLNKLKGVPNGQIQKKLKISFDFLTNLEKDLFFSIACFYLGQSEKCVTHLLKGSRFPVEMVMRVIIERSLVKVINGNLHVHELLQMIGREIGPNKPKLKYIYDVFLSFRGEDTRKSFATHLCTSMRQAGIEVYMDEERIERGKNISSSLLQAIECSRISIIIFSKNYAGSSWCLQELEKIMECYKTTYQEVLPIFYDVEPSEVRKQQNAFGKAWKRLIRRPSSSKGKKLTLKKVLIEAANLSGWDMKNFRTERELIDHVIEAVTMKIDNKKSLFVAHHPVGLESRVQDIIQLLNNKSNEVIIAGIWGMGGIGKTTVSKTIYNEIGENFEGKCFLANVREVWKGDNGQVYLQEQLLAGILKSRKMAIPNTEVGKTLIKELICKKRVLLVLDDLNNENQIKALCGSREWFGRGSRIIITTRDQRLLHILQVDNVYNVKEMNDNESLELFSWHAFKQATPNRDFIELSRKIVSYSRGLPLALEILGSYLFDREIYYWESVLEKLQQIPCGQIYEVLKISYDGLTDQTEKDIFLDICCFFIGKDRSYATQILNACNLYADIGITHLIERSLVKVGYKNKLEMHDLLRDMGREIIREQSQDELENCTRLWCHDDVLKVLRNYTGTMATKGLTLKMSGDSSSSLDAQAFEKMQKLRLLRLDYVQLLGDYGYLSKELTWLCWHGFSLESMPNNLSLEKVIVIDLKWSNVTKVWEKSQLLKGLKILNLSHSQYLIETPNFSKLPHLEKLILKDCPLLSTLHPSIGSLRYIILLNLKDCKGLNHLPRSIYDLKSLQTLNLSGCSKIEKLEEEIEQMESLTTLVANHIAITHVPVSLVRLKCIKYVSLCGYDGLTRDLFPSLLLSWMSPINHSKSLFQAFGMIASLSNKGLSHPTLEGRPSTSQSSRRETHDLIGFHERVHMKTSETFLSSLTIRVGGFSKVIDTLIQSISQGCSERGLGGSSLPGDNYPYWLNFKGDGHSILFEVPHIIGRSLKGLILCIICLSSEDNITSMYPIGVLISNQTKATIEFYKKDAVICSKDEEWQDIITNLEPGNKVQVVVTFASQLAVDSTVIYLIYDEEICQRIMY 1341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0692 1341 SMART till_3 364 504 IPR000157 GO:0007165
Alju05g0692 1341 Pfam TIR domain 365 529 IPR000157 GO:0007165
Alju05g0692 1341 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 365 1107 IPR044974 GO:0006952
Alju05g0692 1341 FunFam Disease resistance protein (TIR-NBS-LRR class) 362 532 - -
Alju05g0692 1341 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 534 795 IPR027417 -
Alju05g0692 1341 PRINTS Disease resistance protein signature 565 580 - -
Alju05g0692 1341 PRINTS Disease resistance protein signature 735 749 - -
Alju05g0692 1341 PRINTS Disease resistance protein signature 642 656 - -
Alju05g0692 1341 PRINTS Disease resistance protein signature 1044 1060 - -
Alju05g0692 1341 SMART AAA_5 562 705 IPR003593 GO:0016887
Alju05g0692 1341 SMART AAA_5 68 206 IPR003593 GO:0016887
Alju05g0692 1341 Gene3D - 32 199 IPR027417 -
Alju05g0692 1341 Gene3D Ribonuclease Inhibitor 836 1162 IPR032675 -
Alju05g0692 1341 SUPERFAMILY Toll/Interleukin receptor TIR domain 361 506 IPR035897 -
Alju05g0692 1341 Pfam NB-ARC domain 546 777 IPR002182 GO:0043531
Alju05g0692 1341 Pfam NB-ARC domain 67 278 IPR002182 GO:0043531
Alju05g0692 1341 SUPERFAMILY "Winged helix" DNA-binding domain 771 877 IPR036390 -
Alju05g0692 1341 Coils Coil 1060 1080 - -
Alju05g0692 1341 Gene3D - 360 533 IPR035897 -
Alju05g0692 1341 SUPERFAMILY L domain-like 891 1127 - -
Alju05g0692 1341 ProSiteProfiles TIR domain profile. 363 530 IPR000157 GO:0007165
Alju05g0692 1341 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 296 IPR027417 -
Alju05g0692 1341 Gene3D - 534 696 IPR027417 -
Alju05g0692 1341 Gene3D - 204 288 IPR042197 -
Alju05g0692 1341 Gene3D - 700 784 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0692 Alju-ChrAlju05 12291085 12310018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0692 46 354 WRKY Transcription Factor Family AT4G12020 29.393 4.19e-24 108