Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0685 ATGGGTCAGGTGAACAAGCCTATGAGCCAGCAGGGCAATAAATATGAAGTGTTCTTGAGTTATAGTAGAGGCAGAGGCACTCAAAAGTCTTTCTCTTGCTGTCTTTATTCATCACTAAGGAAAGCTGGAATTTCCGTTCTTAAAGATTCTATCTCAATAGAATTATTGCAAAGCATTGTTGAAGGCTCTGAAATTTCAATCATCATCTTCTCTAAACACTATGCTAGTTCCAGAAGGTGCCTCGAGGAACTCACAAAAATAATGGAGTTTCACAAGTCACATGATCTGGTAGTTCTTCCCATATTCTTTGGTGTGGATCAATCTGATGTTTGTAATCAGGAATCTACTTTTGGAAAAGCATTTCGAAATCTTGTACAAAGAATTTCACCTACTAAAGATGAAGTGTCACGGTGGATGACAGCTCTCAGTGAAGCTGGAGGCAATCGTGGCTTTTTTGTGCCTAATTTCAAGTCCAAGACTGAAAGTGAGGTTATTCAGAATATTCTCGGGCAAGTTCGTCAAATATTGGACATGAAAGGCTTGTTTGACGGAGATGGCCTGGTCGGAGTTCGTTCTCAAGCACAAGAAGTGATTAAAATGCTTCGAAAGCATAAATCAAAAGATGTTGTCACCATAGGTATATGGGGAATGGGGGGTATAGGCAAAACAACAATTGCCAGACACATTTTTGACTGCATTCAGCACGAATTCAAAAATACACGTTTTCTTTCAAATGTGAGGGAAGCTTGGGAGAGGAAAGGCACAATTGGTTTGGATAAAGAACTTGTTTCAGCAATATTTGATGGAAGAGTTCACATTAATAAGGTACTTGTTGTGCTTGATGATGTGAATGACTTGAAGCAACTACACTATTTACGTGATCTTTATGGTCATGGGATGAGAATAATCATTACAACTAGAGATTTACATCTACTTGAGGCCTTTAATGTGGATGATGTATATAGCGTGAAACTTTTGAGCAATAATGACTCTCTTCAACTTTTTAGTAGAAAAGCATTGAAACCAGCAATTCCTGAGGGAGAATTCATCGAAGTCAGCAAAAGAATGGTTGCTTATGCTGAAGGTCTTCCACTAGCTCTTGAAGTTCTTGGCTCGTTTTTTGCTGGGAAGTCACTGATAGGATGGGAGTCGGCACTGATGAAACTAAGCACAGATATCCCTCCTGCTATATACAACACACTAAAGCGTAGCTTTGACTCTTTATATGATAGCGAAAAAGAAATATTTCTAAACGTAGTTTCTTTCCATATTGGGGAGGACATGAATCATGTGATACAAAAGTTGGATGGGCATGGATGTAATGCTAGCATTGGGATAAGAGCCCTAGTGGATCGAAGCCTTGTAACCATTGATGAGAACAACAAAATGAGAATGCATAATGTGTTGCAGCTCATGGGAAGACAAATAACACGTGAAACTTCACAAAACGAGCTCCCAAATCAAGGTCATAGATATGAGGTGTTCTTGAGTTTTAGAGGTGAAGACACTCGGGCAACTTTTACTTCACATCTCTATTCAGCTCTATGCAATGCTAGTATTATTGTTTTCAAAGATGACGTTGAGCTTCCCAGGGGAAATTATATCAAAACAGAACTATTGCAAGCAATTGGAAGTTCAAAGATTGCAATTATCATCTTCTCTAGGGAATACGCTGGATCTTCATGGTGTTTGGAGGAATTGTCAATTATCATGGCACTTCATAAATCAAATGATCAAGTGGTTTTACCCGTGTTTTACGATGTGGACCCATCAGAAATTCGTCATCAAACTTCTAGCTTTGGAGAAGCATTTAAAGATCTTATAGAAAGAATTTCACCACCAGAATATCAAGCATCCAACTGGAGGGCAGCGCTTGCTGAGGCCGGGGGTACGGCAGGGATTGTTGTCCTTGGTTCCAGATATTAA 1926 0.3941 MGQVNKPMSQQGNKYEVFLSYSRGRGTQKSFSCCLYSSLRKAGISVLKDSISIELLQSIVEGSEISIIIFSKHYASSRRCLEELTKIMEFHKSHDLVVLPIFFGVDQSDVCNQESTFGKAFRNLVQRISPTKDEVSRWMTALSEAGGNRGFFVPNFKSKTESEVIQNILGQVRQILDMKGLFDGDGLVGVRSQAQEVIKMLRKHKSKDVVTIGIWGMGGIGKTTIARHIFDCIQHEFKNTRFLSNVREAWERKGTIGLDKELVSAIFDGRVHINKVLVVLDDVNDLKQLHYLRDLYGHGMRIIITTRDLHLLEAFNVDDVYSVKLLSNNDSLQLFSRKALKPAIPEGEFIEVSKRMVAYAEGLPLALEVLGSFFAGKSLIGWESALMKLSTDIPPAIYNTLKRSFDSLYDSEKEIFLNVVSFHIGEDMNHVIQKLDGHGCNASIGIRALVDRSLVTIDENNKMRMHNVLQLMGRQITRETSQNELPNQGHRYEVFLSFRGEDTRATFTSHLYSALCNASIIVFKDDVELPRGNYIKTELLQAIGSSKIAIIIFSREYAGSSWCLEELSIIMALHKSNDQVVLPVFYDVDPSEIRHQTSSFGEAFKDLIERISPPEYQASNWRAALAEAGGTAGIVVLGSRY 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0685 641 Gene3D - 325 409 IPR042197 -
Alju05g0685 641 SMART till_3 491 631 IPR000157 GO:0007165
Alju05g0685 641 SMART till_3 14 148 IPR000157 GO:0007165
Alju05g0685 641 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 417 IPR027417 -
Alju05g0685 641 SUPERFAMILY "Winged helix" DNA-binding domain 397 481 IPR036390 -
Alju05g0685 641 ProSiteProfiles TIR domain profile. 13 176 IPR000157 GO:0007165
Alju05g0685 641 Pfam TIR domain 492 627 IPR000157 GO:0007165
Alju05g0685 641 Pfam TIR domain 14 172 IPR000157 GO:0007165
Alju05g0685 641 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 483 IPR044974 GO:0006952
Alju05g0685 641 Pfam NB-ARC domain 274 392 IPR002182 GO:0043531
Alju05g0685 641 Pfam NB-ARC domain 194 237 IPR002182 GO:0043531
Alju05g0685 641 Gene3D - 487 641 IPR035897 -
Alju05g0685 641 Gene3D - 9 182 IPR035897 -
Alju05g0685 641 PRINTS Disease resistance protein signature 360 374 - -
Alju05g0685 641 PRINTS Disease resistance protein signature 211 226 - -
Alju05g0685 641 PRINTS Disease resistance protein signature 270 284 - -
Alju05g0685 641 ProSiteProfiles TIR domain profile. 490 641 IPR000157 GO:0007165
Alju05g0685 641 FunFam Disease resistance protein (TIR-NBS-LRR class) 488 640 - -
Alju05g0685 641 Gene3D - 183 320 IPR027417 -
Alju05g0685 641 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 147 IPR035897 -
Alju05g0685 641 SUPERFAMILY Toll/Interleukin receptor TIR domain 483 633 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0685 Alju-ChrAlju05 11917853 11943517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0685 7 483 WRKY Transcription Factor Family AT4G12020 29.719 1.62e-48 182