Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0683 ATGGGTCAGGTGAATAAGCCCATGAGGAAGCACGATTCCATGGTTCAGGTGAATAAGCCTACGAGGCAGCAGGATTCCATGGGTCAGGTGAATAAGCCGATGAGTCAGCAGGGCAATAAATATGAAGTGTTCTTGAGTTATAATAGAGGTGAAGACACTAGAGAGTCTCTCCCTTCACGTCTCTATTCAAGTCTAAGGAAAGCTAAAATTTCCGTTCTCAAAGATGATATCTCGAATGAACTATTGCAAAGCATTATTGAAGGTTCTAAAATTTCAATCATCATCTTCTCTGAAGATTATGCTAGTTCCAAAAGTTGCCTTGAGGAACTCACGAAAATCATGGAGTTTCGCAGAGCATATGACCAGGTAGTTCTTCCCATATTCTATGGTGTGGATCGGTCTGATGTTCGTAATCAAGAATCTAGCTTTGGAGAAGCATTTCAAAATCTTGTACAAAGAATTTCACCCACTGAATATGAAGTCTCAAGATGGAGGAGAGCTCTTCGTGAAGCTGGAGGCAATTTTGGGTTTGTCGTACCTTATTGGGAGTCCAACAATGAAAGGATTGTCAAGCTTGTTCATCGTATATTAGACGGGAAAGGCCGGTTTGCCACAAAAGACCTAGTTGGAGTTAGTTCTCAAGTGAAAGAAGTTATTACAATGCTTCAACAGCATCAATCTAAAGATGTTGTCTCCATAGGGATATGGGGAATGGGGGGTATTGGCAAAACAACCCTTGCCAAACTCATTTTTGACCACATTCAGTACGAATTCGAATGTTCATGTTTTCTTTCAAATGTCAGGGAAACTTGGGAAAGAAAAGACAAACTTGGTTTACAAAGGGAACTTCGTTCAGCAATATCACCAGGTATAATAGTAGATGAGGTTGACGCAGCAAAAGTCGAGGAAAGAAAGGTACTTATTGTGGTTGATGACGTGAATGGCTTGGATCAACTGTATGATTTATGTGGAAACCGTTATGGTGAAGGGAGTAGAATAATAATTACAACTAGAGATTTAGATCTGCTTAAGGCTTTTAAAGTGGAGCTGGTATATAGCATGAAACTTTTGAGCGATCATGAGTCTCTTCAACTTTTTAGTGAAAAAGCATTTAAACAAGCAAGTCCTGAAGGAGACTTCATCCAACTTAGCAGAAAAATAGTTGCTTATGCTGAGGGACTGCCACTAGCTCTGAAAGTCCTCGACTCTATTTTGGCTAAGACGTCATTGATAGAATGGGAGTCGACATTGATGAAACTAAACACAGTTGCCCCTCCTCAAATATACAACACACTAAAGCTTAGCTTTGACCATTTAGATGACAACCAAAAAGAAATATTTCTTAACATTGTTTTATTTTATATTGGGGAGGACATGAATGATGTGATCCAAAAGTTGGATGGCCGTGGATATAATGCTGGATTTGGGATAAGAGCCCTAGTGGACCGAAGCCTTGTGACCATTCACAAGAACAAACTTGAAATGCATAATCTGTTGCAGCTTATGGGAAGACAAATAATACGTGAAAGTTCACAAAACGAGCTTCCGAATCGAGGTCATAGGTATGAGGTGTTCTTGAGTTTTAGAGGTGACACTCGGGTAAATTTTACTTCACATCTCTATTCAGCTCTATGTAATGCTGGCATTATTGTTTTCAAAGATGATGTTGAGCTTCCTAGAGGAAAACATATCAAAATGGAACTAATGCAAGCAATGGGAAGTTCAAAAATTGCAATCATCATCTTCTCTAGGGAATATGCTGGATCTAAATGGTGTTTGGAGGAATTGTCAATAATCATGGAGCTTCATAAATCAAATAATCAGGTAGTTCTACCCGTGTTTTATGACGTGGATCCATCAGAAATTCGTAATCAAACTTCTAGTTTTGGAGAAGCATTTAAAAATCTTCTACAAAAAATTTCACCATCAGAAGTTCAAATTTCCAACTGGAAGATAGCTCTTGCTGAGGCTGGAGGCATTGCAGGGATCGTTGTGCTGGGTTCCAGAGACGAGAGTGCAAATGCAAAACAACTATTGCCAAAGCCATTTATAATCAAATTGGTCGCACGTTTGAAAGTAGAAGTTTCCTTCCAAAGATCAGACAAGTTTGGGACAAAGAAAAGGACCAAGTGA 2133 0.3929 MGQVNKPMRKHDSMVQVNKPTRQQDSMGQVNKPMSQQGNKYEVFLSYNRGEDTRESLPSRLYSSLRKAKISVLKDDISNELLQSIIEGSKISIIIFSEDYASSKSCLEELTKIMEFRRAYDQVVLPIFYGVDRSDVRNQESSFGEAFQNLVQRISPTEYEVSRWRRALREAGGNFGFVVPYWESNNERIVKLVHRILDGKGRFATKDLVGVSSQVKEVITMLQQHQSKDVVSIGIWGMGGIGKTTLAKLIFDHIQYEFECSCFLSNVRETWERKDKLGLQRELRSAISPGIIVDEVDAAKVEERKVLIVVDDVNGLDQLYDLCGNRYGEGSRIIITTRDLDLLKAFKVELVYSMKLLSDHESLQLFSEKAFKQASPEGDFIQLSRKIVAYAEGLPLALKVLDSILAKTSLIEWESTLMKLNTVAPPQIYNTLKLSFDHLDDNQKEIFLNIVLFYIGEDMNDVIQKLDGRGYNAGFGIRALVDRSLVTIHKNKLEMHNLLQLMGRQIIRESSQNELPNRGHRYEVFLSFRGDTRVNFTSHLYSALCNAGIIVFKDDVELPRGKHIKMELMQAMGSSKIAIIIFSREYAGSKWCLEELSIIMELHKSNNQVVLPVFYDVDPSEIRNQTSSFGEAFKNLLQKISPSEVQISNWKIALAEAGGIAGIVVLGSRDESANAKQLLPKPFIIKLVARLKVEVSFQRSDKFGTKKRTK 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0683 710 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 41 514 IPR044974 GO:0006952
Alju05g0683 710 SUPERFAMILY "Winged helix" DNA-binding domain 427 511 IPR036390 -
Alju05g0683 710 SUPERFAMILY Toll/Interleukin receptor TIR domain 34 174 IPR035897 -
Alju05g0683 710 PRINTS Disease resistance protein signature 300 314 - -
Alju05g0683 710 PRINTS Disease resistance protein signature 391 405 - -
Alju05g0683 710 PRINTS Disease resistance protein signature 232 247 - -
Alju05g0683 710 ProSiteProfiles TIR domain profile. 520 695 IPR000157 GO:0007165
Alju05g0683 710 Gene3D - 35 200 IPR035897 -
Alju05g0683 710 Gene3D - 201 351 IPR027417 -
Alju05g0683 710 MobiDBLite consensus disorder prediction 1 34 - -
Alju05g0683 710 ProSiteProfiles TIR domain profile. 39 200 IPR000157 GO:0007165
Alju05g0683 710 FunFam Disease resistance protein (TIR-NBS-LRR class) 518 681 - -
Alju05g0683 710 Pfam NB-ARC domain 213 422 IPR002182 GO:0043531
Alju05g0683 710 SMART till_3 40 174 IPR000157 GO:0007165
Alju05g0683 710 SMART till_3 521 660 IPR000157 GO:0007165
Alju05g0683 710 Gene3D - 356 440 IPR042197 -
Alju05g0683 710 MobiDBLite consensus disorder prediction 17 34 - -
Alju05g0683 710 SUPERFAMILY Toll/Interleukin receptor TIR domain 513 662 IPR035897 -
Alju05g0683 710 Gene3D - 519 683 IPR035897 -
Alju05g0683 710 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 205 449 IPR027417 -
Alju05g0683 710 Pfam TIR domain 522 671 IPR000157 GO:0007165
Alju05g0683 710 Pfam TIR domain 40 196 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0683 Alju-ChrAlju05 11884485 11889088 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0683 209 514 WRKY Transcription Factor Family AT5G45050 35.669 1.48e-48 183