LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju05g0632	ATGTCCCTCTTCAATCCTGAACTGAAGAAGGGAGTTCGACAGTGGGTGGGGAAGGGAAGGAGTGAAGAAAGACTGAGGGAGTTGAGGACTGATAGTAGCAGACATTTGGGACTTAACAAATACTGGTTGTCCGTGCCAAACGTTTTCGCCAAGCATTTGAAGCAATATTTGATTCGTCTTATTCATTTATCTACAAATACACAGAAGAAGAAGAAGAAAGACACCAAGTTGCAACTTCTGGTTTACATGTTGAGCACCTTATCGACAAATAACAAAATGCAAAGACAAGAAGGCCAAAAGTGTAGAATGAAGGAGATTCTTGTTGTTGCTCTTATTTTGTTGCAGACTTGTTCCCAAGTAGCAACTTCTGGTTCACATGTTGAGTACCTTCCTGGTTTTGAAGGCCCTCTTCCTTTTCATCTTGAAACTGGGTATGTGGGAGTGGGAGACTCAGCAGCAGAAGAAGGAGCAGGAGAAGTGTTCTATTACTTTATTGAGTCAGAGAACAATCCACAAGAGGACCCTCTTATGCTTTGGCTCTCTGGTGGCCCCGGTTGCTCTTCATTCTCAGGCCTCATTTTTGAAATAGGTCCAATCGCATTCGAAGTTGAGAAATACAATGGTAGCCTCCCAAATTTGGTTTTGAGGCCACAAGCCTGGACAAAGTGGCTAATTGATCACCCAAAATTTCAAACAAATCAAGTTTATATTGGTGGTGACTCATATTCTGGTATTCCGCTTCCTGGTATTGTTCAAGAAATTTCAAATGGAAATGAAGAAGGAATCCAGCCATGGATAAATCTCCAGGGATATGTGCTAGGGAATCCTGTCACAACAAGGGAACGAGTAAATTATTTACCCTCATTTGCTCATGGAATGGCACTCATTTCCGATGAACTTTATATGCTCTTGTTAGGGCTTGATTTATTTAACACTTTGGAACCCAAATGTGAGTTGGCTTCGCCTAGACCTCATGGATTTTGGAGTAGAAGATCTCTCATCAACAAATTTCGAAGGCCTCTTGATTCTCGCCTTGCACGGCCACCTTTAAATTGCAAGAGTTATGTATATTTCCTCAGCTACGATTGGATTCGGGATGACAAAGTTCAGGAGTCACTAAATATTCGAAAGGGTACCATAAAGAATTGGCAACGTTGTAACAACTTTGACTATACTTATACCATCAGCAGTGCCTTTCCATATCACGTAAATCTAAGCCAAAAAGGCTATCGATCTTTGATTTACAGTGGAGATCATGACCCAGCAGTTCCATTTATGTCGACTCAAGCATGGATCAGAGATTTAAACTACTCCATTGTTGAAGACTGGAGACCTTGGCTTGTCAATGGCCAGGTTGCAGGATATACGAGAAGGTATTCTAATCGGATGACATTCGCCACTGTAAAGGGTGCAGGACATATAGCTCCTGAGTATAAACCTGAAGAATGTTTTGAGATGTTCATTCGGTGGATGTCTAACAAGCCTTTGTGA	1491	0.4165	MSLFNPELKKGVRQWVGKGRSEERLRELRTDSSRHLGLNKYWLSVPNVFAKHLKQYLIRLIHLSTNTQKKKKKDTKLQLLVYMLSTLSTNNKMQRQEGQKCRMKEILVVALILLQTCSQVATSGSHVEYLPGFEGPLPFHLETGYVGVGDSAAEEGAGEVFYYFIESENNPQEDPLMLWLSGGPGCSSFSGLIFEIGPIAFEVEKYNGSLPNLVLRPQAWTKWLIDHPKFQTNQVYIGGDSYSGIPLPGIVQEISNGNEEGIQPWINLQGYVLGNPVTTRERVNYLPSFAHGMALISDELYMLLLGLDLFNTLEPKCELASPRPHGFWSRRSLINKFRRPLDSRLARPPLNCKSYVYFLSYDWIRDDKVQESLNIRKGTIKNWQRCNNFDYTYTISSAFPYHVNLSQKGYRSLIYSGDHDPAVPFMSTQAWIRDLNYSIVEDWRPWLVNGQVAGYTRRYSNRMTFATVKGAGHIAPEYKPEECFEMFIRWMSNKPL	496

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju05g0632	496	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	125	222	IPR001563	GO:0004185\|GO:0006508
	Alju05g0632	496	PRINTS	Carboxypeptidase C serine protease (S10) family signature	463	476	IPR001563	GO:0004185\|GO:0006508
	Alju05g0632	496	PRINTS	Carboxypeptidase C serine protease (S10) family signature	223	248	IPR001563	GO:0004185\|GO:0006508
	Alju05g0632	496	SUPERFAMILY	alpha/beta-Hydrolases	127	495	IPR029058	-
	Alju05g0632	496	FunFam	Carboxypeptidase	351	495	-	-
	Alju05g0632	496	Gene3D	alpha/beta hydrolase	121	221	IPR029058	-
	Alju05g0632	496	FunFam	Carboxypeptidase	398	493	-	-
	Alju05g0632	496	Pfam	Serine carboxypeptidase	221	493	IPR001563	GO:0004185\|GO:0006508
	Alju05g0632	496	Gene3D	alpha/beta hydrolase	222	496	IPR029058	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju05g0632	Alju-ChrAlju05	11007918	11013126	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju05g0632	363	496	Calmodulin-binding Proteins	AT2G22960	60.741	1.34e-54	179