Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0615 ATGACTTCTTTTCTGAAACCTGAGAATGCTCTAAAAAGAGCAGAAGAATTGATCAATGTCGGACAGAAGCAGGATGCTTTGCAAACTCTCCATGGCCTAATCACTTCAAAAAGATATAGGGCATGGCAGAAGACACTTGAAAGGATAATGTTTAAATATGTAGAACTGTGTGTAGACATGCGGAAAGGGCGATTTGCAAAGGATGGGCTGATTCAGTATCGAATTATATGTCAGCAAGTTAATGTTAGCTCACTGGAGGAGGTGATCAAACATTTCATGCATCTGTCAACTGAGAAAGCTGAGCAAGCTCGGAGCCAGGCACAGGCACTAGAAGAGGCTCTTGATGTTGATGATTTAGAGGCTGATAAAAGGCCTGAAGACTTGATGCTAAGCTATGTGAGTGGGGAGAAGGGAAAAGACAGATCTGACAGGGAGCTTGTTACTCCGTGGTTTAAGTTTCTTTGGGAAACGTACAGGACTGTGCTTGAAATATTACGGAACAATTCTAAACTGGAAGCTCTATATGCTATGACAGCTCATCGGGCTTTTCAATTTTGTAAGCAATACAAGCGAACAACTGAGTTTCGTAGACTTTGTGAAATTATAAGAAATCATCTAGCCAATCTTAATAAATATCGAGACCAACGGGACCGACCTGATCTTTCAGCACCTGAAAGCTTGCAACTATATCTAGACACCAGATTTGAGCAACTGAAAGTTGCCACTGAACTTGAACTCTGGCAGGAAGCTTTTAGATCTATTGAAGATATACATGGACTAATGTGCATTGTCAAGAAAACACCCAAGGCATCTTTGATGGTTCTTTACTATGCTAAGCTTACAGAAATATTTTGGATATCGTCAAGCCATCTTTATCATGCATATGCATGGTTCAGGCTCTTTTTACTGCAGAAGAGTTTCAATAAGAATCTGAGCCAGAAGGATTTGCAATTGATAGCTTCATCTGTTGTTCTGGCTGCACTTTCAGTGCCTCCCCATGATCACACTCAAGGTGTATCTCATTTGGAATTGGAGCATGAAAAAGAGAGGAATTTGAGGATGGCTAATCTCATTGGTTTTAACCTTGAAAGTAAACCTGATGGCAGAGAAGTGCTTTCAAGGTCAGCCCTTCTTGCTGAACTGGTGTCCAAGGGTGTAATGTCTTGTGCAACTCAGGAAGTGAAGGACATTTATCATCAACTGGAACATGAATTTCTTCCCCTAGACCTTCCATCTAAAGTTCAGCCTCTGCTAACCAAAATATCGAAGTTAGGGGGTAAGCTCTCCTCTGCTTCTTCTGTCCCTGAGGTGCAGCTGTCTCAGTATGTCCCAGCACTGGAGAAACTAGCTACCTTGAGGTTGCTACAGCAGGTGTCCAACATATACCAGACAATGAAGATTGGGACCTTATCTAGAATGATCCCCTTTTTTGATTTTTCTGTTGTGGAAAAGATATCTGTGGATGCTGCTAAGCATAATTTTGTATCCATGAAAGTTGACCACATGAGGAATGTTGTAGTTTTCTGCAAGACGAGTCTTGAGTCTGATGGCTTAAGGGATTCCCTGGCTAGTCTTGCTGAATATCTGAATAAGCCAAGACTCGTGATTTATCCTCCAGATAGCAAGCCATCAAATCTTGAAGCTTGGCTATCCAATTTGATTGAGGCTATAACGAAGGAACACAAGAGGCTTCTTGCACGGAAATCAATTATTGAGAAGCGAAAAGAAGAACAAGAGCGACAGCTTCTTGAAATGGAAAGAGAGGAGGAATCAAAAAGATTGAGACAGCAGAAAATAACTGAAGAAGCAGAACAAAGAAGACTTGCCAATGAGTATGAGCAGAGGAAGAACCAGAGAATTCTCAGAGAAATAGAAGAAAGAGAAATGGAAGAAGCTCAAGCATTGCTTCAGGAAGCTGAGAAGCGGATCAAAAAGAAGGGAAAGAAGCCAATCATAGAGGGTGAAAAAATGACCAAGCAAACACTGATGGAGCTGACTTTGACTGAACAACTCCGGGAAAGACAAGAAATGGAAAAGAAACTACAAAAACTAGCTAAAACGATGGACTATTTGGAAAGAGCCAAAAGAGAGGAGGCTGCTCCCTTGATTGAAGCTGCGTATCAAAAGCGCCTTGTTGAAGAAAAGCTTCTTCATGAGCGTGAGCAACAGCTTGAGATTGAAGTTAGCAAACAGTGCCATGAGGGAGATCTCAAGGAGAAGGAAAGACTGGCTCGTATGGTTGGCAATAAGGAGATTTATCAAGAGAGGGTTGTCAGTCGTCGGCAGGAAGAATTTAATAGATTGAGGCGGGAAAGAGAGGAGCGAATCTCAAGGATTTTGCAGTCCAGGAGACAAGAGAGGGAAAAGATGAGGAAGTTGAAGTATTATCTGAGGTTAGAAGAAGAGAGACAGCAAAAATTGAGGGAAGAAGAGGAAGCTAGGATGCGTGAAGATGCTGAGAGGCGGAAGAAGGAAGAGGCTGAGCGGCTGGCGAAATTGGCTGAGATAGCTGAAAAGCAGAGGCAAAGAGAGAAGGAACTTGAAGAGAAGGCAGAGAGGCAGAAGAAAGAAACACTGTTTGGAAGAGGTGGCGAAGCCGCTGTGAAGCCTCTTGAACCTTCAGCCCGCACGTTGGAGGCTGGATCTGCCGCTCCCGCAGCAGCAGCAGCTGCTGCACCAAGCCCTGCGAAATACGTACCTAGGTTCCGGCGTGAGAGAACTGAAGGCCCAGCTCCTGCCGCTCCTCCAGAAACTGACCGATGGACAAACCCCGGCAGGGAGGATGGTGGTGACAGATGGCGTAGTGATGATCGAAGACCTGCTTTCGGTGCTGGTGGGGGTTCAAGGTCGGCATCAACATGGTCCTCATCCAGGCGTGATCGTTGA 2886 0.4414 MTSFLKPENALKRAEELINVGQKQDALQTLHGLITSKRYRAWQKTLERIMFKYVELCVDMRKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKVATELELWQEAFRSIEDIHGLMCIVKKTPKASLMVLYYAKLTEIFWISSSHLYHAYAWFRLFLLQKSFNKNLSQKDLQLIASSVVLAALSVPPHDHTQGVSHLELEHEKERNLRMANLIGFNLESKPDGREVLSRSALLAELVSKGVMSCATQEVKDIYHQLEHEFLPLDLPSKVQPLLTKISKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSNIYQTMKIGTLSRMIPFFDFSVVEKISVDAAKHNFVSMKVDHMRNVVVFCKTSLESDGLRDSLASLAEYLNKPRLVIYPPDSKPSNLEAWLSNLIEAITKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKRLRQQKITEEAEQRRLANEYEQRKNQRILREIEEREMEEAQALLQEAEKRIKKKGKKPIIEGEKMTKQTLMELTLTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQKRLVEEKLLHEREQQLEIEVSKQCHEGDLKEKERLARMVGNKEIYQERVVSRRQEEFNRLRREREERISRILQSRRQEREKMRKLKYYLRLEEERQQKLREEEEARMREDAERRKKEEAERLAKLAEIAEKQRQREKELEEKAERQKKETLFGRGGEAAVKPLEPSARTLEAGSAAPAAAAAAAPSPAKYVPRFRRERTEGPAPAAPPETDRWTNPGREDGGDRWRSDDRRPAFGAGGGSRSASTWSSSRRDR 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0615 961 MobiDBLite consensus disorder prediction 805 826 - -
Alju05g0615 961 FunFam Eukaryotic translation initiation factor 3 subunit A 268 342 - -
Alju05g0615 961 Coils Coil 615 649 - -
Alju05g0615 961 Coils Coil 796 857 - -
Alju05g0615 961 Gene3D UVR domain 217 267 - -
Alju05g0615 961 MobiDBLite consensus disorder prediction 921 939 - -
Alju05g0615 961 FunFam Eukaryotic translation initiation factor 3 subunit A 352 494 - -
Alju05g0615 961 Pfam PCI domain 373 508 IPR000717 -
Alju05g0615 961 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 952 IPR027512 GO:0005852
Alju05g0615 961 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Alju05g0615 961 Gene3D - 268 342 - -
Alju05g0615 961 Gene3D - 362 493 - -
Alju05g0615 961 MobiDBLite consensus disorder prediction 839 961 - -
Alju05g0615 961 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 961 IPR027512 GO:0005852
Alju05g0615 961 FunFam Eukaryotic translation initiation factor 3 subunit A 217 268 - -
Alju05g0615 961 Coils Coil 561 600 - -
Alju05g0615 961 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 525 IPR000717 -
Alju05g0615 961 MobiDBLite consensus disorder prediction 839 862 - -
Alju05g0615 961 Coils Coil 667 697 - -
Alju05g0615 961 Coils Coil 93 120 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0615 1 958 Eukaryotic Initiation Factors Gene Family AT4G11420 73.021 0.0 1314