Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0588 ATGACCCCACGATCACCATTTTTGTCTGTAATCAAGGATACTGTTTTCCTTAGATTGGAAGAATGGGTCTACTTCGCTCTTGTGAATTGTGATCCGTTGAAGCGTGTTATTGCCCTCCTCTCTGATTCCGTCAATAGGCCATGTCTTCTTCCTTTTCCACTTCTTCGCCCATGTCTTCTTCCTTCCACTTCTTCATGGACTTACGATGTGTTCTTGAATTTTAGAGGTGCAGACACTCGTCGTCGTGATTTCACTCCTCATCTTTATAACGCTCTAAGACAGTCGGGAATCCATGTTTTCATGGACACTCCAGGGATTGGACGGGGAGGACAGATCTCAAGCTCATTATGGCAGGCAATTGAAAGATCACGAATTGCATTAGTCATTTTGTCTCCAGATTATGCTTATTCTAGATGGTGCCTGGATGAACTGGTGAAAATAATGGAGTGTCAGAGAAATGTAGCTCAGGTGGTTATGCCCATATTCTATGATGTAGATCCGGCAGATGTTCGCCATCAGAGAGGCGCATACGGTGAAGCAATGAAACGACACGAGCAAAGGTTGGGAAGAGGGAGTGATCAAGTGTTGCGGTGGAGGGAGGCTCTCACGGCAGCTGCCAACATTTCCGGCTTAGAAAAGGCAAATCGGTATGAAAGTGAGCTGATTGAGATTATTGTTGACGATATTTTAGAAAATTTAGACGTTGGACAATTGTTTGTTGCTGACCATCCAGTGGGAATAGAGTCGCGAATTCATGAACTGACAATTGGATGGTCAAAAAAGATATCACCAAAAGCTCTTATCATAGGCCTCTGGGGGATGGGAGGCATTGGCAAAACAACTGTTGCCAAAGCCATTTACAATAAAATTGGTCGTCATTATGGAGCAAGAAGTTTCCTTGCAAAGATAAGAGAAAATTCAAGGCATGCTAACGACCAAGTTAATTTGCAAAAACAACTCATCTCTGATATCACTAAAACACAAGTTTTCAAGATACCTAACATTGATAGAGGGAAAAAAATTATTCAGGAAAGATTCCCCAACATAGAAGCATTTGTTGTATTGGATGAAGTGGATAGTGTCAATCAACTGAATGCATTATGTGAGAGTCATGAATGGTTTTGTCCTGGGAGTGTAATAATCATAACAACTAGAGATTTGCATCTACTTAATGTCATTGAAGCCGACTATAAGTATAGAATGAGAGAAATGAATAAAACTGAGTCTCTTGAGCTCTTAAGTTGGCATGCCTTTAAGCATGTAGATCCATTAGAAAACTTCATAAAGCTCTCTGAAAATGTAGTTGATTATTGTGGCGGACTTCCATTGGCTCTTGAAATCCTTGGTTCTTGTTTGCATGGGAGAACAATTGAAGAATGGGAGGATGTGTTGTCCAAGCTACAAAGGATTCCCAATAAAGATATACATGCAAAGTTAAAAATAAGCTATGATGGATTGAATGATTATATGGAGAAGGATATTTTCCTTGACATATGTTGCTTCTTTATCAATAAGGACAGGAATTATGTTACACAGATATTAGATGGTTGTGGATTTCATGCAAAAACCGGACTACAAATCCTCATAGAGCGGAGCCTCATAAAAGCTGGTAGGAATAATAAGCTTGAAATGCACGATTTACTACAGGAAATGGGGAAAGAAATCATCCGTGAAAGCCCACCTAAAAATATTGGCGAACGTAGTAGATTATGGTTTCACGAAGATGTACTTGATGTGTTGACAGAACATACTGGAACCAAAGCCATTGAAGGTATATCTTTGAAGATGCCAAGAACCAATAGAGAGTGTCTCCTTGATTCTAAGGCATTTAAGATGATGAACAAACTTAGATTGCTCCACCTGGATTATGTAAATCTTGAAGGTGATTATAAGGATCTTTCCAAAAAGTTGAGGTGGATTTGTTGGCCTGGATTTCCATTAAAATACACTCCAAACAGCTTTTACCAAAAGAAATTAGTTGCTATTGACTTCAGATATAGCAACCTCAAAGTAGTTTGGAAAGAACCCCAGTTGCTAGAGATTGTGCGACAAAGCAGACATTCTGAAAGAGAAAATTTCGCAGGGATGGAATTATGGTGGCTGGGATGA 2109 0.3973 MTPRSPFLSVIKDTVFLRLEEWVYFALVNCDPLKRVIALLSDSVNRPCLLPFPLLRPCLLPSTSSWTYDVFLNFRGADTRRRDFTPHLYNALRQSGIHVFMDTPGIGRGGQISSSLWQAIERSRIALVILSPDYAYSRWCLDELVKIMECQRNVAQVVMPIFYDVDPADVRHQRGAYGEAMKRHEQRLGRGSDQVLRWREALTAAANISGLEKANRYESELIEIIVDDILENLDVGQLFVADHPVGIESRIHELTIGWSKKISPKALIIGLWGMGGIGKTTVAKAIYNKIGRHYGARSFLAKIRENSRHANDQVNLQKQLISDITKTQVFKIPNIDRGKKIIQERFPNIEAFVVLDEVDSVNQLNALCESHEWFCPGSVIIITTRDLHLLNVIEADYKYRMREMNKTESLELLSWHAFKHVDPLENFIKLSENVVDYCGGLPLALEILGSCLHGRTIEEWEDVLSKLQRIPNKDIHAKLKISYDGLNDYMEKDIFLDICCFFINKDRNYVTQILDGCGFHAKTGLQILIERSLIKAGRNNKLEMHDLLQEMGKEIIRESPPKNIGERSRLWFHEDVLDVLTEHTGTKAIEGISLKMPRTNRECLLDSKAFKMMNKLRLLHLDYVNLEGDYKDLSKKLRWICWPGFPLKYTPNSFYQKKLVAIDFRYSNLKVVWKEPQLLEIVRQSRHSERENFAGMELWWLG 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0588 702 PRINTS Disease resistance protein signature 345 359 - -
Alju05g0588 702 PRINTS Disease resistance protein signature 268 283 - -
Alju05g0588 702 PRINTS Disease resistance protein signature 438 452 - -
Alju05g0588 702 Gene3D - 403 487 IPR042197 -
Alju05g0588 702 ProSiteProfiles TIR domain profile. 66 233 IPR000157 GO:0007165
Alju05g0588 702 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 68 682 IPR044974 GO:0006952
Alju05g0588 702 SMART till_3 67 208 IPR000157 GO:0007165
Alju05g0588 702 Gene3D - 236 399 IPR027417 -
Alju05g0588 702 SUPERFAMILY Toll/Interleukin receptor TIR domain 62 210 IPR035897 -
Alju05g0588 702 FunFam Disease resistance protein (TIR-NBS-LRR class) 64 235 - -
Alju05g0588 702 Pfam TIR domain 68 233 IPR000157 GO:0007165
Alju05g0588 702 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 239 498 IPR027417 -
Alju05g0588 702 Pfam NB-ARC domain 260 486 IPR002182 GO:0043531
Alju05g0588 702 Gene3D - 62 235 IPR035897 -
Alju05g0588 702 SUPERFAMILY "Winged helix" DNA-binding domain 474 580 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0588 Alju-ChrAlju05 10194041 10201217 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0588 63 674 WRKY Transcription Factor Family AT4G12020 29.167 9.27e-63 226