Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0569 ATGATTTGTGTTGTGTGGCTTCTTCAGCTCATTTTATCAAACAGTATGGCTACAAGAAACAGTGTGGTCTGCTTCTTCTATATTGTGTTGCTTAACATTTTCTTGAGTTCTCTGCCAATTAAATCAGCCCCTGAAGCTGCTCTTGTGACAGAGCTTCCTGGATTCAGTGGCACTATACCTTCAAAGCATTATGCAGGATATGTGACTGTGGATGAAGCTCAAGGGAGGAATCTGTATTACTACTTCGTTGAATCAGAAGGAAATCCATCTGAGGATCCAGTGGTTTTATGGCTCAATGGTGGACCCGGATGCTCTAGCTTCGATGGGTTTGTGTATGAACATGGTCCTTTCAATTTTGAAAAGGCCACAACCAAGGGATCAATGCCCACATTGCACCTCAATCCTTACAGCTGGTCAAAGGTTTCCAACATTATCTATTTGGATTCTCCAGCTGGTGTGGGATTTTCTTACTCTAAAAATACTTCTGATTACCCAACTGGAGACCTAAGGACTGCTTCAGAGTCACATACCTTTCTCCTTAAGTGGTTTGAGCTTTATCCTGAGTTCCTTTCCAACCCGTTCTTCATCGCCGGAGAGTCGTATGCCGGAATTTATGTTCCTACACTAGCTTATGAAGTAGTAAAAGGAATTGAAGCTGGTGCAAAACCAAACCTGAATTTCAAGGGGTATTTGGTAGGAAATGGCTGTACAGATGATGAAATTGATGGCAATGCTCTTGTTCCATTTGTACATGGGATGGGTCTTATCTCAGATAAATTGTATCAGTTGGTTGATGAAATTAACGTATACAACACTCTAGAACCATGCTATCATGGGACAGAGACACTTGAGACTGCAGCATCTTACATTAGGCTTCCGTCTAGCTTCCGGCAGCTAGGCGCGACCGAGAGGCCTTTACCGGTCAGAAAAAGGATGTTTGGTCGTGCTTGGCCACTTAGAGCTCCGGTGAAAGATGGAATTGTACCGACTTGGCCGGAACTTAGCAGTAGCGGCACTATTGTTCCATGCACTGATGATGAGGCTGCAACCATATGGCTGAACAATGACACAGTCAGGAAAGCAATTCACACTGCATCGGAAAGTGATGTGAAGACTTGGATTATATGCACGGAAGTTATTAGTCCTTTTGTTCATGATTCTGGGAGCATGCTTAAATATCACTTGAGTTTGACATCTAAAGGATATCGAGCACTTATATATAGTGGCGATCATGATCTGTGTGTTCCATTCACTGGGAGTCAAGCATGGACCAACTCAATGGGATACGAAGTAGTTGATGAATGGAGGCCATGGATACTTGATAATCAAGTTGCTGGTTATATACAAGGGTATGATAAAAATCTCACCTTTATGACCATCAAGGGGGCTGGACACACTGTTCCAGAATACAAGCCACAAGAGTCACTGTACTTCTATAAGCAATTTCTGGATGGATCAGCGATATGA 1467 0.4294 MICVVWLLQLILSNSMATRNSVVCFFYIVLLNIFLSSLPIKSAPEAALVTELPGFSGTIPSKHYAGYVTVDEAQGRNLYYYFVESEGNPSEDPVVLWLNGGPGCSSFDGFVYEHGPFNFEKATTKGSMPTLHLNPYSWSKVSNIIYLDSPAGVGFSYSKNTSDYPTGDLRTASESHTFLLKWFELYPEFLSNPFFIAGESYAGIYVPTLAYEVVKGIEAGAKPNLNFKGYLVGNGCTDDEIDGNALVPFVHGMGLISDKLYQLVDEINVYNTLEPCYHGTETLETAASYIRLPSSFRQLGATERPLPVRKRMFGRAWPLRAPVKDGIVPTWPELSSSGTIVPCTDDEAATIWLNNDTVRKAIHTASESDVKTWIICTEVISPFVHDSGSMLKYHLSLTSKGYRALIYSGDHDLCVPFTGSQAWTNSMGYEVVDEWRPWILDNQVAGYIQGYDKNLTFMTIKGAGHTVPEYKPQESLYFYKQFLDGSAI 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0569 488 Pfam Serine carboxypeptidase 53 485 IPR001563 GO:0004185|GO:0006508
Alju05g0569 488 FunFam Carboxypeptidase 390 485 - -
Alju05g0569 488 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 49 472 IPR001563 GO:0004185|GO:0006508
Alju05g0569 488 FunFam Carboxypeptidase 42 266 - -
Alju05g0569 488 ProSitePatterns Serine carboxypeptidases, serine active site. 196 203 IPR018202 GO:0004185
Alju05g0569 488 SUPERFAMILY alpha/beta-Hydrolases 49 485 IPR029058 -
Alju05g0569 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 455 468 IPR001563 GO:0004185|GO:0006508
Alju05g0569 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 134 146 IPR001563 GO:0004185|GO:0006508
Alju05g0569 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 147 157 IPR001563 GO:0004185|GO:0006508
Alju05g0569 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 182 207 IPR001563 GO:0004185|GO:0006508
Alju05g0569 488 Gene3D alpha/beta hydrolase 50 488 IPR029058 -
Alju05g0569 488 FunFam Carboxypeptidase 342 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0569 Alju-ChrAlju05 9552505 9559426 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0569 349 488 Calmodulin-binding Proteins AT2G22960 42.857 1.78e-35 129