Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0524 ATGTCGTCCACAAGCATCGGCGATGTGAGCCGCCCACACCATCGCACGTTTCCGGAGTTAGATTTTCAGGACTTGAAGGTGATCTCCGCCGTGGGCCGCGGAGCCAAGGGCGTTGTGTTCGCCGCCATGAGGAATGACGATGAGTTTGGTGAGTATTTCGCTTTGAAAGTGATCTCCAAGGCTTTGATTCAGAAGAAATCGAAGGCAATGGACAACGATGAGGGCGGCGAGTGCAAGAGGGTGTCGTTTGAACAGCAGGTGCTTCGTCGTTTTGATCATCCGCTCTTGCCTAGGTTGCGAGGGGTTTTGGAAACCGAGAAGATCATTGGATACGCCATCGATTACTGCCCCGGCGGCAATCTCCATTCTCTTCGGAAAAAGCAGACCGAGAAGATGTTTTCCGATGATGCCATAAGGTTTTATGCTGTAGAATTGGTCCTTGCATTGGAATATCTGCACAATTTGGGCATTGTGTACAGAGATTTGAAGCCAGAAAACATACTAATCCAAGAAACTGGTCACATAATGCTCGTCGATTTCGATCTATCCAAAAAACTAAACCCGAGATCTCCAAAATCCCAGAGTAGCTCCTCGTCGCCGATTTCCCACTCGTCAAAGACGGCGGCGATGAAGAACTTACGGAAGAAACGCTTCTTCCGATTCTACAGTTGCTCCATGGCAAGCCCCTTGTCGTACGAACCAGAGGCCTTACCGGAATTCCAACCTCCGCGGCGGAGCGAGTCAGACTCGGTGGAGAAATCGAACTCGTTCGTTGGAACGGAGGAATATGTGGCACCCGAAGTAATTTCGGGGAAGGGACATAACTTCGGAGTCGATTGGTGGTCACTGGGCGTCGTTTTATACGAGATGCTGTACGGGACGACGCCGTTTAGGGGAGAGAACAGGAAAGAAACGTTTTATCGGATTTTGACGAAGAAACCAGAGCTAACCGGAGAGAAAACGCCGTTGAGGGATTTGATCGCGAAGTTGCTGGAGAAGGATAGTGACCGCCGGATCGACGTGGAGGGGATCAAGGGTCACGATTTCTTCAAAGGGGTTCAGTGGGACTCGGTTTGTGAAGTCGCCCGGCCGCCATATATTCCGGTGAATGAAATTGGGGACACAAATGGGTTTAACAAAACTCAGGTGGAGATATTTGTCCATGAGGTATTTTTTGGAAAGGATGGTGAGGAAGAAACTGAAAAGGAGAAAAAGAAAGAAGAAAATAATAATAATAATGATATTAGTGATAGAGCGGATGATAACAAGAACGTGTGGGTAGAGAAGTTGAGTCAGGGTCACACAGAGAACGAGAATTTTTTAATTTTTTGA 1332 0.4812 MSSTSIGDVSRPHHRTFPELDFQDLKVISAVGRGAKGVVFAAMRNDDEFGEYFALKVISKALIQKKSKAMDNDEGGECKRVSFEQQVLRRFDHPLLPRLRGVLETEKIIGYAIDYCPGGNLHSLRKKQTEKMFSDDAIRFYAVELVLALEYLHNLGIVYRDLKPENILIQETGHIMLVDFDLSKKLNPRSPKSQSSSSSPISHSSKTAAMKNLRKKRFFRFYSCSMASPLSYEPEALPEFQPPRRSESDSVEKSNSFVGTEEYVAPEVISGKGHNFGVDWWSLGVVLYEMLYGTTPFRGENRKETFYRILTKKPELTGEKTPLRDLIAKLLEKDSDRRIDVEGIKGHDFFKGVQWDSVCEVARPPYIPVNEIGDTNGFNKTQVEIFVHEVFFGKDGEEETEKEKKKEENNNNNDISDRADDNKNVWVEKLSQGHTENENFLIF 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0524 443 Gene3D Phosphorylase Kinase; domain 1 370 380 - -
Alju05g0524 443 Gene3D Transferase(Phosphotransferase) domain 1 250 369 - -
Alju05g0524 443 MobiDBLite consensus disorder prediction 235 254 - -
Alju05g0524 443 MobiDBLite consensus disorder prediction 188 207 - -
Alju05g0524 443 Pfam Protein kinase domain 252 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g0524 443 Pfam Protein kinase domain 27 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g0524 443 ProSiteProfiles Protein kinase domain profile. 25 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g0524 443 SUPERFAMILY Protein kinase-like (PK-like) 13 380 IPR011009 -
Alju05g0524 443 Gene3D Phosphorylase Kinase; domain 1 24 119 - -
Alju05g0524 443 PANTHER FLIPPASE KINASE 1-RELATED 19 373 - -
Alju05g0524 443 MobiDBLite consensus disorder prediction 397 423 - -
Alju05g0524 443 Gene3D Transferase(Phosphotransferase) domain 1 120 190 - -
Alju05g0524 443 FunFam Serine/threonine-protein kinase OXI1 252 369 - -
Alju05g0524 443 FunFam Serine/threonine-protein kinase OXI1 120 188 - -
Alju05g0524 443 SMART serkin_6 25 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g0524 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0524 Alju-ChrAlju05 8996067 8997650 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0524 20 443 AGC Kinase Gene Family AT3G25250 58.333 2.73e-156 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Alju05g0524 Pkinase 4.6e-33 CL0016