Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0519 ATGAGTGGAAACGAGATATTAGGCGCGGCTGAACAAGCAAAGAAACAGAACAGGATGGGTAACTCATTCGTCCGGCGCCGACGTTGGGAGCTTGCCATTGAGGCTTATTCCAAGGCAATCGCCCTGTGCCCTCAAATTCCGTCATTTTGGATGAATCGTGCTTTGTGTTACTACAAGCGCAAGGAAAAATTGGGCCTTGGTAGAGGAGGACTGCAGAAGAACTATTCATCTTGA 234 0.4829 MSGNEILGAAEQAKKQNRMGNSFVRRRRWELAIEAYSKAIALCPQIPSFWMNRALCYYKRKEKLGLGRGGLQKNYSS 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0519 77 Gene3D Tetratricopeptide repeat domain 7 75 IPR011990 GO:0005515
Alju05g0519 77 PANTHER E3 UBIQUITIN-PROTEIN LIGASE CHIP 8 62 IPR045200 GO:0000209|GO:0061630
Alju05g0519 77 ProSiteProfiles TPR repeat profile. 13 46 IPR019734 GO:0005515
Alju05g0519 77 Pfam TPR repeat 20 59 - -
Alju05g0519 77 SUPERFAMILY TPR-like 11 62 IPR011990 GO:0005515
Alju05g0519 77 SMART tpr_5 13 46 IPR019734 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0519 9 62 U-box Gene Family AT3G07370 44.444 6.20e-12 57.0