Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0512 ATGGAAAACGAATTCTTCCTCAATGCCGCTTCCCTTCACTTCGAACCTTCTTCTTCAATGCCTACGTGGCAGTCGATTTCATCCGCCATGGATGTTCACGTTCAAGCTCCCGTCCTCAATTGCGCTTCCGAGCAGCCCCAAGATTGCTTCCACAACAACGCCAAATGGGATAATAAGTCAACGGATCATCACGGTCTTCAATTCGATTCTGCTCTGAGCTCGATGGTATCTTCGCCAGCTGCGTCAAATTCCAATGTTATGCCCAACAATGAGAATTTCATGATCAGGGAATTGATAGGGCAATTGGGGAACATTGGTGCGTCTCCTTACATTAATGGCGGAAATAGCACTGATACTTCGTGTTATAGCACTCCCTTGAGCTCGCCTCCGAAGATGAACATGATGAACCAGATGGTGAAAGAGAACTTGCCCAGTTTAGGGAAATCGATGCTTTTGAATTCTAATGTTGCAGAATTCTCATCTGATCCTGGTTTTGCAGAGAGAGCAGCCAAGTTTTCTTGCTTTGGAAGCAGAAGCTTCAATGGCAGAACATACCAACTAGGCATGAACAACGGTCAATTGTCTCTAAGATCTACTCCATCAATGGAAAATGAGAAGCTCGCTAGGGTTTCAAGTAGTCCTGCTCTGAAAGCACTTGGTGGATCTCAAACAGAAGTGGCGAATTCCCAAGAGGAATCAACAATCTCTGAGCAAACCCTAAATGGGGAAAATGGTGTGAATGTGAAATCAAGGAAAAGAAAAGCTACTTCTTCCAAGGGAAACACCAGAGAAACTTCAACATCAACCAATCCTACTCCCAAGGCTAATGAAAGTAATGAAGATTCAAATGCTAAGAAGCGCAGCAAGCCAAATGAGAGTGAAGGGAATGAAAATGGAAGTGTGAAGGTAGAGGAGGAATCAAAAGGAGGTACTACTAGCAATAATGGAGGAGATGAGAAACAGACCAAGAGTAACTCATCAAAACCACCTGAACCTCCAAAAGATTACATTCATGTCAGAGCAAGAAGAGGCCAAGCCACTGACAGCCACAGCCTTGCAGAAAGAGTCCGAAGGGAAAAGATCAGTGAGAGGATGAAGCTTCTCCAAGATCTTGTACCAGGTTGCAATAAGGTCACTGGTAAAGCACTTATGCTTGATGAAATCATAAACTATGTGCAGTCATTGCAGCGTCAAGTTGAGTTTTTATCTATGAAACTGGCTTCTGTCAACACCAGGCTGGACTTCAACATTGACAATCTAATCTCAAAAGATATGCTTCAATCAAGTAACTCTTTGGCACACCCATTATTCCCTCTAGATTCCTCAGCACAAGCCTTTTATGGGCAACACACTCAGCAAAACCCAGGAATCCACAATGACATTCTTAATGGTGTTATGTCCCACAGCACAGTAGACCCATTAGAAACTGCCTCTCTGTGCCAAAACATGGGCATGCAATTACCTCCTCTTAATGGCTTTAATGAAGGTGGTTCTCAGTTTCCAGTAGCATTCTGTGAGGATGACCTTCACGCCATTGTTCAAATGGGATTTGGCCAAAGTGGAGCTGGAAAATCACCCGGTCATTCCCAGAACTTCAACGGTTCAAATCAAGTCACTCATCTGAAAGTTGAACCCTAA 1638 0.4383 MENEFFLNAASLHFEPSSSMPTWQSISSAMDVHVQAPVLNCASEQPQDCFHNNAKWDNKSTDHHGLQFDSALSSMVSSPAASNSNVMPNNENFMIRELIGQLGNIGASPYINGGNSTDTSCYSTPLSSPPKMNMMNQMVKENLPSLGKSMLLNSNVAEFSSDPGFAERAAKFSCFGSRSFNGRTYQLGMNNGQLSLRSTPSMENEKLARVSSSPALKALGGSQTEVANSQEESTISEQTLNGENGVNVKSRKRKATSSKGNTRETSTSTNPTPKANESNEDSNAKKRSKPNESEGNENGSVKVEEESKGGTTSNNGGDEKQTKSNSSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLDFNIDNLISKDMLQSSNSLAHPLFPLDSSAQAFYGQHTQQNPGIHNDILNGVMSHSTVDPLETASLCQNMGMQLPPLNGFNEGGSQFPVAFCEDDLHAIVQMGFGQSGAGKSPGHSQNFNGSNQVTHLKVEP 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0512 545 MobiDBLite consensus disorder prediction 214 336 - -
Alju05g0512 545 SMART finulus 351 401 IPR011598 GO:0046983
Alju05g0512 545 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 345 395 IPR011598 GO:0046983
Alju05g0512 545 Gene3D - 342 417 IPR036638 GO:0046983
Alju05g0512 545 MobiDBLite consensus disorder prediction 216 246 - -
Alju05g0512 545 CDD bHLH_AtBPE_like 335 420 - -
Alju05g0512 545 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 229 449 IPR024097 GO:0006355
Alju05g0512 545 MobiDBLite consensus disorder prediction 260 278 - -
Alju05g0512 545 FunFam Basic helix-loop-helix transcription factor 342 414 - -
Alju05g0512 545 MobiDBLite consensus disorder prediction 279 304 - -
Alju05g0512 545 MobiDBLite consensus disorder prediction 305 329 - -
Alju05g0512 545 Pfam Helix-loop-helix DNA-binding domain 349 396 IPR011598 GO:0046983
Alju05g0512 545 MobiDBLite consensus disorder prediction 523 545 - -
Alju05g0512 545 MobiDBLite consensus disorder prediction 520 545 - -
Alju05g0512 545 Coils Coil 392 412 - -
Alju05g0512 545 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 343 414 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0512 Alju-ChrAlju05 8784352 8786905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0512 1 499 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 46.680 3.37e-111 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju05g0512 HLH 4.3e-06 No_clan