Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0508 ATGGGTGCGTATTTCCAGGGATTCCATGCACAAGAGGCGTGCCACTGGTGGCAAGAAGAAGGCTTGGAGAAAGAAGAGAAATTAGATTGTAATGGTTCTAAATTTGTGATTCTAAAGGAGGATCATATCCTTAAGATGTACGAGCTTGGTCATCAACCAGCAAACACTAAGTTGTCAAGTAACAAGACAGTCAGGAGAGTTCGTGTTAGAGGTGGCAATATGAAATGGAGGGCTTTGCGATTGGATACTGGAAATTATTCCTGGGGTAGTGAAGCAGTGACTCGCAAGACACGTATATTAGACGTGGTTTACAATGCCTCAAACAACGAGCTTGTTCGAACTCAAACACTTGTGAAGAGTGCGATTGTGCAAGTTGATGCTGCTCCATTTAAGCAGTGGTACCTTCAGCACTATGGTGTTGATATTGGCAGGAAGAAGAAAGCAGCTGCCAAGAAGGATTGTACAGAGGAGGGTGAAGCTCCTGCTGAAGAAACAAAGAAAAGTAATCATGTGCTTAGAAAACTAGAGAAGCGTCAGAAAGATCGAAAGCTTGATTCCCACATTGAAGAGCAATTTAGTGGTGGCCGATTGTTGGCTTGCATTTCTTCTCGACCTGGTCAATGTGGCAGAGCTGATGGCTACATTTTGGAAGGCAAGGAGTTGGAATTTTACATGAAGAAAATCCAGAGGAAGAAGGGAAAGGGTGCTGGTGCTGCTTGA 720 0.4403 MGAYFQGFHAQEACHWWQEEGLEKEEKLDCNGSKFVILKEDHILKMYELGHQPANTKLSSNKTVRRVRVRGGNMKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKAAAKKDCTEEGEAPAEETKKSNHVLRKLEKRQKDRKLDSHIEEQFSGGRLLACISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAGAA 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0508 239 FunFam 40S ribosomal protein S8 52 180 - -
Alju05g0508 239 Gene3D - 47 232 - -
Alju05g0508 239 PANTHER 40S RIBOSOMAL PROTEIN S8 44 234 IPR001047 GO:0003735|GO:0005840|GO:0006412
Alju05g0508 239 FunFam 40S ribosomal protein S8 181 234 - -
Alju05g0508 239 Gene3D Ribosomal protein S8e, subdomain 128 195 IPR042563 -
Alju05g0508 239 FunFam 40S ribosomal protein S8 129 195 - -
Alju05g0508 239 Pfam Ribosomal protein S8e 45 216 IPR022309 -
Alju05g0508 239 NCBIfam ribosomal protein eS8 45 218 IPR001047 GO:0003735|GO:0005840|GO:0006412
Alju05g0508 239 CDD Ribosomal_S8e_like 45 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0508 Alju-ChrAlju05 8707878 8709964 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0508 47 239 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 83.420 3.45e-108 308