Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0506 ATGGAGTCGAGGAAGGCAACGAGAACGATGTATGGCGAGATTGAGAATTGCAAGGTTGTCACTGATAGGGTCTCTGGGAAATTAAAAGGTTATGCCTTCATCGGAGTTTTGAAGGAGTTTGTGTATTTCCAGGGATTCCATGCACAAGAGGCGTGCCACTGGTGGCAAGAAGAAGGCTTGGAGAAAGAAGAGAAATTAGATTGTAATGGTTCTAAATTTGTGATTCTAAAGGAGGATCATATCCTTAAGATGTACGAGCTTGGTCATCAACCAGCAAACACTAAGTTGTCAAGTAACAAGACAGTCAGGAGAGTTCGTGTTAGAGGTGGCAATGTGAAATGGAGGGCTTTGCGATTGGATACTGGAAATTATTCTTGGGGTAGTGAAGCAGTGACTCGCAAGACACGTATATTAGACGTGGTTTACAATGCCTCAAACAACGAGCTTGTTCGAACTCAAACACTTGTGAAGAGTGCGATTGTGCAAGTTGATGCTGCTCCATTTAAGCAGTGGTACCTTCAGCACTATGGTGTTGATATTGGCAGGAAGAAGAAAGCAGCCGCCAAGAAGGATTCTACAGAGGGATAA 588 0.4371 MESRKATRTMYGEIENCKVVTDRVSGKLKGYAFIGVLKEFVYFQGFHAQEACHWWQEEGLEKEEKLDCNGSKFVILKEDHILKMYELGHQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKAAAKKDSTEG 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0506 195 FunFam 40S ribosomal protein S8 90 195 - -
Alju05g0506 195 Gene3D - 90 193 - -
Alju05g0506 195 PANTHER 40S RIBOSOMAL PROTEIN S8 82 191 IPR001047 GO:0003735|GO:0005840|GO:0006412
Alju05g0506 195 SUPERFAMILY RNA-binding domain, RBD 11 34 IPR035979 GO:0003676
Alju05g0506 195 CDD Ribosomal_S8e_like 83 182 - -
Alju05g0506 195 Gene3D - 6 35 IPR012677 -
Alju05g0506 195 NCBIfam ribosomal protein eS8 83 166 IPR001047 GO:0003735|GO:0005840|GO:0006412
Alju05g0506 195 Pfam Ribosomal protein S8e 83 169 IPR022309 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0506 Alju-ChrAlju05 8692112 8696527 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0506 83 188 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 91.509 8.00e-67 202