Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0477 ATGGCTGTTCCAAAAGTGGACAAAAAGATGCTTGAAGAACTTGAAGCAATGGGATTTCCAAAGGCAAAGGCAACTCGAGCACTCCATTATTCTGGCAATAATAATGTAGATGATGCTATAAATTGGATAGTTGGTCATGAGAATGATCCTGATATTGATGAGATTCCATTGGTAGACGTAGATATTGAGATTGGTTCTTCTCAATCATTCCCTTTAACAGAAGAAATGGAAATCAAAGCACAGAAGCTAAGGAAGATTAGTTCTAATCATTCATTCCCTATCACAGAAGAATCACAAATCAAAGAACAGAAGCTTAGGGAACAATTGCATAAGATGAAAGAAGAGAAAGAAAAGAAATTGGAGATAGAAAGGGAAAAGGAGAGAATCCAAGCAGGTAAGAAACTCAACGAGATGAAGCGAATTGCTGAAGAGAATGAAAGGCAACGAAATATAGCCTTGTGGAAAGCAGAGAAAGAAGAAGAGAAAAGAGCAAGGGAAATAGTCGTACAGAAACTAGAACAGGATAAGTTCAACAGAAGGTCTAAACTTGGGTTGCCCCTAGAAGGCCATGCAACCGTAAAAACTTCAGCTACGACAGTACAGAAAGAACAGAAACTGCAGAATCCAAAGCCTGTTTACACCGTTACAAAAGTTGATCTCTTGAGAGAACTTTTGAGGTCCCTCAAGCGTAACCACCAGGATGAGCATGCAAGAGTCAGAAGGGCCTTTGAAACACTCTTAATTTATGTTGGGAATGTTATCAAGAATCCCAACCAGGAAAAATACAGGAAGATCCGATTAAGCAACCCATTATTCCAGGATAGAGTTGGGAGTTTGAAAGGAGGTGTGGAATTTCTTGAACTATGTGGGTTTGAGAGAATGGGTGACTTTTTGTATCTTCCTGAGGAAAAGGTGGACATAACACTACTAAATTCAGCTGGATTTGTGTTGAAGTCTGCTATTACAAATCCCTTCTTTGGACTTTTTAGCACTCGGACATTGTTATAA 1008 0.3909 MAVPKVDKKMLEELEAMGFPKAKATRALHYSGNNNVDDAINWIVGHENDPDIDEIPLVDVDIEIGSSQSFPLTEEMEIKAQKLRKISSNHSFPITEESQIKEQKLREQLHKMKEEKEKKLEIEREKERIQAGKKLNEMKRIAEENERQRNIALWKAEKEEEKRAREIVVQKLEQDKFNRRSKLGLPLEGHATVKTSATTVQKEQKLQNPKPVYTVTKVDLLRELLRSLKRNHQDEHARVRRAFETLLIYVGNVIKNPNQEKYRKIRLSNPLFQDRVGSLKGGVEFLELCGFERMGDFLYLPEEKVDITLLNSAGFVLKSAITNPFFGLFSTRTLL 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0477 335 Gene3D - 222 319 - -
Alju05g0477 335 Pfam UBA/TS-N domain 7 43 IPR015940 -
Alju05g0477 335 Gene3D - 7 53 - -
Alju05g0477 335 SMART PGNneu 241 302 - -
Alju05g0477 335 SMART uba_6 7 45 IPR015940 -
Alju05g0477 335 CDD PUB_UBA_plant 225 328 - -
Alju05g0477 335 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 5 46 IPR015940 -
Alju05g0477 335 SUPERFAMILY UBA-like 5 56 IPR009060 GO:0005515
Alju05g0477 335 Coils Coil 95 132 - -
Alju05g0477 335 Coils Coil 155 175 - -
Alju05g0477 335 SUPERFAMILY PUG domain-like 213 325 IPR036339 -
Alju05g0477 335 CDD UBA_PUB_plant 6 53 - -
Alju05g0477 335 PANTHER F13M7.16 PROTEIN 1 328 - -
Alju05g0477 335 Pfam PUB domain 238 306 IPR018997 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0477 Alju-ChrAlju05 8208196 8211436 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0477 1 329 C2H2 Transcription Factor Family AT1G04850 49.699 1.54e-93 280