Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0452 ATGCCATTAGCGGATAGCAATCGAGAGTCACTAGCCGGATTAACCCTCGACGACGTGTTAGCCAACCGAGCCGCCGCCGCCGCGACGTCGAGCCATCAGCTCACAACAACAACAACCACCAACCATCGAACGCTGCTTGACATCATCCGTGAAGACGAGTCTTCCAAAAAAAATCGCAAACCTTGGAAAGATTTCAAAGACAAGCTTCGGCTTAAACGCGCCGAATCTGCTTGGGCTTCCTCCGTCCTAATTCCAGCTTCCGATATCCCTTTCCCGATCCGGAATTACAGAAACCTTCCGTCACAGCTTCCCCGTCGTAGCTCCGTCCGAGTCCTTACATTCTCCGACGTCACGACTCACGGTATGGCAGATCCCACCGAAGAAGCCATCAAGAGTTCCAACCTCGCCGCCACAATGATGACGCGCCAGAGATCCACGCGCCAACAGGTCGGGGATGCAATTTTCGTCGACGAGAAACTCAAGCCTCAGATGTCCCGCGGCTCCTCACGTTTGGGGTCGTTACGCGCGGATTCCATCCGGCGAGAGCGCGTGGTGACGTTTCGTGATAGCAACATTGATAACGATGACGACGATGAGGATGGAAATGGCCAGACGCGCCGCCCGAAGGAGGAGAGGCAGATGTCTGCTAGGGAGGCCGTGGCAGCGCAGGAGGCGGCGGAGGCGGCGGCGGCGGCGCAGGAGGAGGAGGACGAAGAAGAGGAAGATGAAGATGAAGGGCCGTTCGGGAATGGAGGAGGAGGAGGAGGTGCGGTGACGATGTCGCTGATGGACTTGTTGGAGGAGACGGATCGGCAAATGGGACTGGAAGGATCGACGTATAGAATGGACGACGACGATGACGACTATGACGATGATTTTGATGAAGACGAAGATGATTATGAAGAAGGTGAAGAGCACGATTGTTGCGTGTGTATGGTGAAGCATAGAGGTGCGCCATTTGAGCCGTGTGGGCACTCATTTTGCAGGATGTGTTCTCGGGAGCTCACTGTGAGCAAGGGAAATTGTCCTCTCTGCAACAATTTTATCCTGGAGATTCTTGAGGTTTTCTGA 1071 0.5472 MPLADSNRESLAGLTLDDVLANRAAAAATSSHQLTTTTTTNHRTLLDIIREDESSKKNRKPWKDFKDKLRLKRAESAWASSVLIPASDIPFPIRNYRNLPSQLPRRSSVRVLTFSDVTTHGMADPTEEAIKSSNLAATMMTRQRSTRQQVGDAIFVDEKLKPQMSRGSSRLGSLRADSIRRERVVTFRDSNIDNDDDDEDGNGQTRRPKEERQMSAREAVAAQEAAEAAAAAQEEEDEEEEDEDEGPFGNGGGGGGAVTMSLMDLLEETDRQMGLEGSTYRMDDDDDDYDDDFDEDEDDYEEGEEHDCCVCMVKHRGAPFEPCGHSFCRMCSRELTVSKGNCPLCNNFILEILEVF 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0452 356 MobiDBLite consensus disorder prediction 275 299 - -
Alju05g0452 356 SMART ring_2 308 345 IPR001841 -
Alju05g0452 356 MobiDBLite consensus disorder prediction 281 299 - -
Alju05g0452 356 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 283 356 IPR013083 -
Alju05g0452 356 ProSiteProfiles Zinc finger RING-type profile. 308 346 IPR001841 -
Alju05g0452 356 MobiDBLite consensus disorder prediction 187 259 - -
Alju05g0452 356 PANTHER OS01G0917900 PROTEIN 7 356 - -
Alju05g0452 356 MobiDBLite consensus disorder prediction 200 217 - -
Alju05g0452 356 SUPERFAMILY RING/U-box 307 352 - -
Alju05g0452 356 Pfam Zinc finger, C3HC4 type (RING finger) 305 349 - -
Alju05g0452 356 Coils Coil 216 245 - -
Alju05g0452 356 MobiDBLite consensus disorder prediction 230 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0452 Alju-ChrAlju05 7405835 7406905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0452 1 356 C3H Transcription Factor Family AT3G07120 41.117 2.41e-47 162