Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0431 ATGGCCTTGCAGGGAACGGAGAACGCATGCGAAGATACTAATCTTGCAGACAATGAACGAGAAGAATTCTCCGAATCCTTTGTTTGCTGCGTTTGTCTGGATTTATTGTACAAGCCCATTGTACTGTCCTGTGGTCACATATCCTGCTTCTGGTGTGTCCATCAGTCAATGAGCCCCCTATGTGAGTCTCATTGTCCAATTTGTCGGAATCCATATTATCACTTTCCAACAGTCTGTTGGATGCTTCACTTTTTGCTTCTGAAGATGTATCCCGTCTCTTACAAGAGAAGGGAAATTCAAACTCTCGAGGTAGAAAAGAAAGAGGACTGCTACTCTCCTCAATTTAATGATGATAATCTTGTATCGGACGTTAAGTTTGATCATCCAAGTACTTCATCTTCCTGCTATGCTGGAAATCTGGTTTCCAACCCACAGAATGTAGGACTTTCTGCAAGTATGGAGCAGTCAGGTTCTGAAACTCAAAAGCAACATAAGGGCACCATCTGTCCGAAAGATGTTTTTGGTGGAAGTCCTGAAGCTTTTGGGACTCCTGCTCAAGTAAAAATGATGCCTCAGAATGATAGGCAACAGAAGATATCTGCTGCAGATGTGATGTGTTCAGCATGCAAGCAACTTCTTTTTCATCCTGTTGTTCTTAACTGTGGTCATGTATTTTGTGAGTCTTGTATGAAGAACTCAGCCGATGAGATGCTTAGATGTCAAATTTGTCAACTTCCACATCCAAGGGGATTTCCGAAAGTTTGTTTGGAGCTTGATCACTTTATAAAGGAACAATTTCCTGAGGAATATGCAAAGCAAAGAGATGCCGTTCAACTGAGGAATATCAATGACAAACCTGAAACCCCTTCCTGTTCTCTGAATAAGAGTGGAGGAGGAAAAGCAGCATGGTCGTCTGATCCTCACTCAAAAGTACATGTTGGAGTTGGTTGTGATTTTTGTGGGATGTATCCAATTGTTGGAGATAGATACAGATGCAAGGACTGCAAGGAGAAGATTGGTTTTGATCTTTGTGCTGATTGTTATAAAATTCGCAGCAAGATTCCTGGTCGGTTCAATCAGCAGCACACTCCAGATCATGAGTTTGAGCTTAAGCAAATTAACATTATCTATAACATAATGAGGCTGGTTACTGGACAGTTAGGAGATGGTTCGATTGAAAATTTGCCTCTGGAAGGCGAGTTTAGACCTGAAGATCCGGATTTGGTTGGTGATGGTGATGGAGAACATACCCAGAATGACTCTGAAGGCACCGATTGA 1278 0.4202 MALQGTENACEDTNLADNEREEFSESFVCCVCLDLLYKPIVLSCGHISCFWCVHQSMSPLCESHCPICRNPYYHFPTVCWMLHFLLLKMYPVSYKRREIQTLEVEKKEDCYSPQFNDDNLVSDVKFDHPSTSSSCYAGNLVSNPQNVGLSASMEQSGSETQKQHKGTICPKDVFGGSPEAFGTPAQVKMMPQNDRQQKISAADVMCSACKQLLFHPVVLNCGHVFCESCMKNSADEMLRCQICQLPHPRGFPKVCLELDHFIKEQFPEEYAKQRDAVQLRNINDKPETPSCSLNKSGGGKAAWSSDPHSKVHVGVGCDFCGMYPIVGDRYRCKDCKEKIGFDLCADCYKIRSKIPGRFNQQHTPDHEFELKQINIIYNIMRLVTGQLGDGSIENLPLEGEFRPEDPDLVGDGDGEHTQNDSEGTD 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0431 425 PANTHER UNCHARACTERIZED 19 372 - -
Alju05g0431 425 Pfam Zinc finger, ZZ type 312 350 IPR000433 GO:0008270
Alju05g0431 425 SUPERFAMILY RING/U-box 201 247 - -
Alju05g0431 425 Gene3D - 305 371 IPR043145 -
Alju05g0431 425 FunFam E3 ubiquitin-protein ligase PRT1 193 288 - -
Alju05g0431 425 ProSiteProfiles Zinc finger ZZ-type profile. 312 376 IPR000433 GO:0008270
Alju05g0431 425 SMART ring_2 29 68 IPR001841 -
Alju05g0431 425 SMART ring_2 206 243 IPR001841 -
Alju05g0431 425 SUPERFAMILY RING/U-box 306 369 - -
Alju05g0431 425 MobiDBLite consensus disorder prediction 398 425 - -
Alju05g0431 425 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 4 135 IPR013083 -
Alju05g0431 425 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 191 291 IPR013083 -
Alju05g0431 425 MobiDBLite consensus disorder prediction 394 425 - -
Alju05g0431 425 FunFam E3 ubiquitin-protein ligase PRT1 306 371 - -
Alju05g0431 425 SUPERFAMILY RING/U-box 18 78 - -
Alju05g0431 425 FunFam E3 ubiquitin-protein ligase PRT1 20 115 - -
Alju05g0431 425 Pfam RING-type zinc-finger 206 238 IPR027370 -
Alju05g0431 425 ProSiteProfiles Zinc finger RING-type profile. 206 244 IPR001841 -
Alju05g0431 425 SMART zz_5 311 357 IPR000433 GO:0008270
Alju05g0431 425 ProSitePatterns Zinc finger RING-type signature. 221 230 IPR017907 -
Alju05g0431 425 ProSiteProfiles Zinc finger RING-type profile. 29 69 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0431 Alju-ChrAlju05 7147016 7155206 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0431 14 69 C3H Transcription Factor Family AT1G74990 38.596 2.70e-07 47.8