Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0424 ATGGCTCTTTCATCAATCCTTCGCGTTCTTCTCTTCTTATCTCTGTCTTTCCATTGTTCTTCATCTTCATCATCATCACTTAACAGTGGCTCCTCTCTCTCAGTTGAGAAACCAGAAGATGTTATTCTCTCACCCAACGCCGTCTTCTCTGCTGGTTTCTACCCCGTCGGTGATAACGCCTTTGTCTTCTCCGTTTGGTTCACCAAAAACCCCACCATCGTTTGGACGGCAAACCGCGACCAACCTGTCAACGGAAAGCGGTCATCACTTTCACTCCATAACACCGGAAACCTCGTCCTCTCCGACGCCGGACAGTTCGACGTGTGGTCCACCGACACCAGCTCGTCTTCGACAACACAATTAACTCTCAACAACAATGGAAATATAGTACTCTACGAACTCCATTCAAAGAAAAGAAATATCCTATGGCAGAGCTTTGATTTCCCGACAAACTCTCTACTTCCTGGACAACAACTCACGAGATACACAAAGCTTGTCTCTGATAGAAGTGGCACCAACCATTCCTCTGGTTTCTACAAGCTTTCGTTCGACGACGACAACATTCTTAGCCTTCTGTACGATGGCCCCGATCTCTCTAGCAAATATTGGCCAGTCCCATGGCTTGTGAGTTGGGATGCAGGGAGGATGACTTTTAATAGTAGGAGAATCGCAGTGTTAGATTCCCTTGGAAGATTCAATTCAACAGATAATTTTGGATTCAAAACTTCCGATTATGGGGTTGTGATCCAAAGAATATTGAAACTAGATTCTGATGGAAACATCCGAGTGTATAGCCTTCAGAACAATCTATGGGAGGTGACGTGGCAAGCCATATTTGATGGTTGCGTTGTGCATGGAATTTGTGGAGCAAATAGCACGTGCATGTATTATCCTAGAAAAGGAAGGGAGTGTTTGTGCCTTCCAGGATATACAATGAAGAACCTTAGTGATTGGTCTTATGGGTGTGAACCCAAGTTTGAACTCTCATGTGATACAAATGAGTCTACCTTCTTGAAATTGCCACATGTTGAGCTATATGGGTATGACTATTTTTACAAGGAAAACATCACTTATAGTGATTGTGAGGATGAATGCTTACAAGATTGCGAGTGCAGGGCGTTTCAGTACTCGTTTAACGATAATGGTTTCTTTCGTTGCTATACGAAAAGAGTTATGCTCAATGGTCGTCGATCGCCGAGCTTCAAAGGAACAACCTACTTGAAGCTGCCCAAAACTAAAAGCCTTAATAATGGTGTGTTCTTCGCTGACGAAGAAATTGCTCAAGAAAATGGTTATGTTTGTTCGGTGACGAAGCTCGAAAGGGCCTATGAAAAGAGAAAGGCCAACAGTTTTGTGAAGTTCTTTCTTTGGTTGTCGGTCGCGGTTGGTGCGTTTGAAGTCCTCTTTGTTTTTCTAACTTGGTTTTGTTTGATGAGAACCAAACAAAAAAACTCTGATGTAAACCAACAAGGGTTCAATTTTCTGTCCCCTTTTGGGTTTAGAAGGTTTTCTTACTCTGAGCTAAAACAAGCAACGAAAGGGTTCACAGAAGAAATTGGAAGAGGAGCAGGTGGCATAGTGTACAAAGGAGTTTTGCCTGATCAACGCATAGCAGCAATAAAGAAGCTTAATAATGACAATATTGGAGCCAAACGAGAAGAAGGAGAATTTCTAGCTGAATTGAGCATCATTGGTAGGCTTAACCACATGAACTTGATCGAAATGTGGGGTTATTGTGCTGAGGGGAAGCACAGATTATTGGTTTATGAATACATGGAGAATGGTTCTTTATCACAAAATCTCAAATCAAACACTCTTGATTGGACCAAAAGATACAACATTGCTCTCGGAACAGCAAGGGTTCTAGCCTACTTACACGAACAATGCTTGGAGTGGATTCTGCATTGTGACATAAAGCCTCAGAATATACTTCTGGATTCCGATTACCAACCCAAGGTGGCAGATTTTGGCTTATCTAAGCTTCTAAATCGAAGCGAACATAACGCTGAAAGCTTATCAATGATAAGAGGAACAAGAGGATACATGGCACCTGAATGGATTTTCAACATGCCAATAACATCGAAGGTCGATGTTTATAGCTTTGGGATTGTTGTGTTGGAGATGATAACAGGAAGGAATGCGATGATGATGATGGGAAGTCACAATGATGAAGGAGAAGAGGCACAGAATATAAGGCTTGTGACATGGGTGAGAGAGAAGAGGAAGAGAACAACTTCGTTTCAGGAAGCCAGGTTGTCGTCACCTTCGTCACCATATTGGGTAGAGGAAATAATTGACCCTACGATTGGATTAGAGTTTGGGGTTGAAGAGAGGCAAAAGATAGAAACTTTGGCAAGTGTGGCTTTGAAGTGTGTTGAGGAAGACAAAGATGAAAGGCCCACCATGAGCCAAGTTGTTGAGATGCTTCAAAGCTATGAAGATGATGATGCTTCTTCTTAG 2460 0.4248 MALSSILRVLLFLSLSFHCSSSSSSSLNSGSSLSVEKPEDVILSPNAVFSAGFYPVGDNAFVFSVWFTKNPTIVWTANRDQPVNGKRSSLSLHNTGNLVLSDAGQFDVWSTDTSSSSTTQLTLNNNGNIVLYELHSKKRNILWQSFDFPTNSLLPGQQLTRYTKLVSDRSGTNHSSGFYKLSFDDDNILSLLYDGPDLSSKYWPVPWLVSWDAGRMTFNSRRIAVLDSLGRFNSTDNFGFKTSDYGVVIQRILKLDSDGNIRVYSLQNNLWEVTWQAIFDGCVVHGICGANSTCMYYPRKGRECLCLPGYTMKNLSDWSYGCEPKFELSCDTNESTFLKLPHVELYGYDYFYKENITYSDCEDECLQDCECRAFQYSFNDNGFFRCYTKRVMLNGRRSPSFKGTTYLKLPKTKSLNNGVFFADEEIAQENGYVCSVTKLERAYEKRKANSFVKFFLWLSVAVGAFEVLFVFLTWFCLMRTKQKNSDVNQQGFNFLSPFGFRRFSYSELKQATKGFTEEIGRGAGGIVYKGVLPDQRIAAIKKLNNDNIGAKREEGEFLAELSIIGRLNHMNLIEMWGYCAEGKHRLLVYEYMENGSLSQNLKSNTLDWTKRYNIALGTARVLAYLHEQCLEWILHCDIKPQNILLDSDYQPKVADFGLSKLLNRSEHNAESLSMIRGTRGYMAPEWIFNMPITSKVDVYSFGIVVLEMITGRNAMMMMGSHNDEGEEAQNIRLVTWVREKRKRTTSFQEARLSSPSSPYWVEEIIDPTIGLEFGVEERQKIETLASVALKCVEEDKDERPTMSQVVEMLQSYEDDDASS 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0424 819 Pfam S-locus glycoprotein domain 251 313 IPR000858 GO:0048544
Alju05g0424 819 SUPERFAMILY Hairpin loop containing domain-like 332 387 - -
Alju05g0424 819 FunFam S-receptor-like serine/threonine-protein kinase 481 591 - -
Alju05g0424 819 SMART blect_4 33 149 IPR001480 -
Alju05g0424 819 ProSiteProfiles Bulb-type lectin domain profile. 18 144 IPR001480 -
Alju05g0424 819 CDD PAN_AP_plant 326 410 - -
Alju05g0424 819 Gene3D Phosphorylase Kinase; domain 1 477 591 - -
Alju05g0424 819 Gene3D - 19 147 IPR036426 -
Alju05g0424 819 Pfam D-mannose binding lectin 72 163 IPR001480 -
Alju05g0424 819 Pfam Protein kinase domain 516 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g0424 819 PIRSF SRK 1 818 IPR024171 GO:0004674
Alju05g0424 819 ProSiteProfiles PAN/Apple domain profile. 330 410 IPR003609 -
Alju05g0424 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 633 645 IPR008271 GO:0004672|GO:0006468
Alju05g0424 819 ProSiteProfiles Protein kinase domain profile. 513 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g0424 819 FunFam Putative receptor-like protein kinase 592 816 - -
Alju05g0424 819 Gene3D Transferase(Phosphotransferase) domain 1 592 819 - -
Alju05g0424 819 ProSitePatterns Protein kinases ATP-binding region signature. 519 542 IPR017441 GO:0005524
Alju05g0424 819 CDD STKc_IRAK 519 810 - -
Alju05g0424 819 CDD EGF 282 311 - -
Alju05g0424 819 PANTHER OS07G0415500 PROTEIN 4 815 - -
Alju05g0424 819 CDD B_lectin 42 149 IPR001480 -
Alju05g0424 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 205 IPR036426 -
Alju05g0424 819 SUPERFAMILY Protein kinase-like (PK-like) 491 810 IPR011009 -
Alju05g0424 819 Pfam PAN-like domain 330 388 IPR003609 -
Alju05g0424 819 SMART serkin_6 513 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g0424 819 ProSiteProfiles EGF-like domain profile. 278 316 IPR000742 -
Alju05g0424 819 SMART ntp_6 332 409 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0424 Alju-ChrAlju05 7011302 7013761 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0424 474 810 Receptor kinase-like Gene Family AT1G60800 37.500 5.87e-62 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Alju05g0424 Pkinase 8.5e-56 CL0016