Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0423 ATGATTTGCTTCGCATGCTTTTCTTCACACCCAGAAAAAGCGTCAAAGAAATCCCACCATGGAAAGAATACAGGGTCGTCTCCATATACAACTTCTGTCCCATTAGAAGCCCCTTCGCTGCCACGCCATGAAACTCATCACCCTTATCCAAAGCCCACCACTTCACAGCCAACAGAAGCTGAAACAAATAAGGATGCCAGCACTGAAGACATTGGCAGCAATAACATTACTTCACAAAACTTCACCTTCCGGGATCTAGCGGTGGCGACAAGGAACTTCCGGCAAGAAACCCTAATTGGTGAAGGTGGATTCGGGAGGGTTTATAAAGGGAGACTTGAAAAAACCAACCAGGATGTAGCTGTGAAGCAACTTGACAGGAATGGATTTCAAGGGAATAGAGAGTTCCTTGTTGAAGTGTTGATGTTGAGCCTCTTGCATCATGAGAATCTAGTGAATCTTGTTGGTTATTGTGCTGACGGAGATCAGAGACTTTTAGTATACGAGTACATGCCATTTGGATCCGTAGAGGATCATCTTCTTGATTTGTCTCCTGATCAAAAGCCACTAGATTGGAATACAAGGATGAAAATAGCTTTGGGAGCAGCAAAAGGATTAGAATATTTGCATGACAAGGCCAAGCCACCAGTGATCTATAGGGACTTGAAAGCAGCAAACATCTTACTAGACAAGGACCTCAATGCAAAACTTTCAGATTTTGGACTAGCCAAGCTTGGACCTATGGGGGACAAGTCCCATGTTTCTTCTAGAGTCATGGGAACTTATGGATATTGTGCCCCTGAATATCAACGAACAGGTCAACTCACTATAAAATCAGACGTTTATAGTTTTGGAGTTGTCTTGCTCGAATTGATCACCGGAAAAAGAGTTATTGACACCACAAGATCCACGCGGGAACAGAACCTTGTTGCTTGGGCACAAACAATATTCAAGGACCCTCATAGACATCAAGAACTAGCAGATCCTCTTCTAAAAGGAAACTTCCCTTTAAAAGCACTGAACCAAGCAGTGGCTATGGCAGCCATGTGCCTGAACGAGGAAGCTGCTGCGCGACCATTAATGAGCGACGTAGTGAGTGCCCTTAGCTTCCTTGGGACAGACAATGATAACTCTCAAGGCGAAGGAGGAGGTCATGATGATAATGTTGAAGATGATGAAACATACTTTGAAAGCCAACATAATGTTGCTAATAAACAAGCCAACACTACTGTTCAATGGGATCTTAAAATATAA 1251 0.4333 MICFACFSSHPEKASKKSHHGKNTGSSPYTTSVPLEAPSLPRHETHHPYPKPTTSQPTEAETNKDASTEDIGSNNITSQNFTFRDLAVATRNFRQETLIGEGGFGRVYKGRLEKTNQDVAVKQLDRNGFQGNREFLVEVLMLSLLHHENLVNLVGYCADGDQRLLVYEYMPFGSVEDHLLDLSPDQKPLDWNTRMKIALGAAKGLEYLHDKAKPPVIYRDLKAANILLDKDLNAKLSDFGLAKLGPMGDKSHVSSRVMGTYGYCAPEYQRTGQLTIKSDVYSFGVVLLELITGKRVIDTTRSTREQNLVAWAQTIFKDPHRHQELADPLLKGNFPLKALNQAVAMAAMCLNEEAAARPLMSDVVSALSFLGTDNDNSQGEGGGHDDNVEDDETYFESQHNVANKQANTTVQWDLKI 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0423 416 MobiDBLite consensus disorder prediction 50 76 - -
Alju05g0423 416 FunFam Serine/threonine-protein kinase PBS1 170 382 - -
Alju05g0423 416 CDD STKc_IRAK 99 367 - -
Alju05g0423 416 PANTHER OS07G0668900 PROTEIN 3 376 - -
Alju05g0423 416 MobiDBLite consensus disorder prediction 12 76 - -
Alju05g0423 416 Pfam Protein kinase domain 94 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g0423 416 SUPERFAMILY Protein kinase-like (PK-like) 79 373 IPR011009 -
Alju05g0423 416 Gene3D Phosphorylase Kinase; domain 1 53 169 - -
Alju05g0423 416 Gene3D Transferase(Phosphotransferase) domain 1 170 391 - -
Alju05g0423 416 FunFam Serine/threonine-protein kinase PBS1 63 169 - -
Alju05g0423 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Alju05g0423 416 ProSitePatterns Protein kinases ATP-binding region signature. 99 122 IPR017441 GO:0005524
Alju05g0423 416 ProSiteProfiles Protein kinase domain profile. 93 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g0423 416 SMART serkin_6 93 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0423 Alju-ChrAlju05 6983798 6986776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0423 1 377 Glycoside Hydrolase AT3G07070 68.930 0.0 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Alju05g0423 Pkinase 8e-49 CL0016