Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0416 ATGCGCAAAAAGGAGGGTCCACACACAAACATGTTTGAGATGCTTCTGTTTACTCTTCTTTGGTTGCTGATTTCAGCTCAAATCGCAACTTCTGCTCAAACTGTACACCACCTTCCTGGATTTGAAGGGCCTCTTCCTTTTCATCTTGAAACTGGGTATGTGGGAGTAGGAGAATCAGAAGAAGTGCAATTGTTTTACTATTTTATATCGTCTGAGAGAAACCCTAAAGAAGACCCTCTTATGCTTTGGATATCTGGGGGTCCTTGCTGCTCTTCACTTTCAGGACTTATACTTGAAATAGGCCCAATAGAATTTGCCGTTGAGGAATACAAAGCGGGCCGCGCGCCTAAGTTAGAATTGAGGCCCTGGTCATGGACAAAGGTATGTAGCATCATTTTTGCAGATTTGCCCGTTGAAACTGGATTCTCTTATTCAAAAACACCCAATCCTCCACGAAGTGATTATGAATTAGTTTACCATGCCCATCAGTTTCTTCGAAAGTGGCTTCTGGGACACCCGGAATATTCCTCAAATCAAGTGTACATTGGGGGTGACTCGTACTCTGGCATTTATGTCCCTCCTATTGTTCAAGAAATTTCTAATGGAAACAAAAGAGGCCTTGACCCACGGATAAATATTCAGGGATACTTACTGGGGAATCCTTTGACAACTAGGAAAGAATTTTTTTATGAAATGGATTTTGCTCATAGACTGGCACTTGTTTCTGATGAATGGTACATGTCGTGGCGGAAAAATTGTTTTGATTCTCCAAACGAATCATGTCGAAGACAGATGGACTACTACAAGAAGCTCACTTCAGGAATTAATCTTTCCAATATTTTGGATCCCAAATATTGCGATCATTGGGCTTCACCTAAACCAAGTGAAGTTTCTTGGATGCGACGATCACTTGTTGAGAACTTTCACGAGCATTTACCACCTTTGAGTTGCAGAAGTTACCCATATTTTCTAATCAACTACTGGGTTAACTATGACCGTGTTCCTATGGCTGTGCATGTTCGACAGGGAAGCGTACGGCGATGGCAACGTTGCAATAAAGAAAATTATGTGCAGGAAATCCCTAGCAGCTTTGAGTATCATGCAAATCTCAGTAACAAAGGTTATCGTTCCTTGATATACAGTGGTGATCATGACTTCGCTATTCCTTATTTCGCAACTCAAGGGTGGATTAGAGCTTTGAACTACTCCATCATTGATGATTGGAGGCCATGGCTTGCTAATGGTCAAGTTGCAGGATACACGACGACTTACGCTAATCAAATGACATTTGCAACAGTAAAGGGTGCGGGACATCTTGCTCCAGAATACAAACAAGAAGAATGCTTTGAGATGTTTAGTAGGTGGATTTCTAAGAAGCCTCTGTAG 1386 0.4177 MRKKEGPHTNMFEMLLFTLLWLLISAQIATSAQTVHHLPGFEGPLPFHLETGYVGVGESEEVQLFYYFISSERNPKEDPLMLWISGGPCCSSLSGLILEIGPIEFAVEEYKAGRAPKLELRPWSWTKVCSIIFADLPVETGFSYSKTPNPPRSDYELVYHAHQFLRKWLLGHPEYSSNQVYIGGDSYSGIYVPPIVQEISNGNKRGLDPRINIQGYLLGNPLTTRKEFFYEMDFAHRLALVSDEWYMSWRKNCFDSPNESCRRQMDYYKKLTSGINLSNILDPKYCDHWASPKPSEVSWMRRSLVENFHEHLPPLSCRSYPYFLINYWVNYDRVPMAVHVRQGSVRRWQRCNKENYVQEIPSSFEYHANLSNKGYRSLIYSGDHDFAIPYFATQGWIRALNYSIIDDWRPWLANGQVAGYTTTYANQMTFATVKGAGHLAPEYKQEECFEMFSRWISKKPL 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0416 461 Pfam Serine carboxypeptidase 39 457 IPR001563 GO:0004185|GO:0006508
Alju05g0416 461 SUPERFAMILY alpha/beta-Hydrolases 34 460 IPR029058 -
Alju05g0416 461 FunFam Serine carboxypeptidase-like 19 28 292 - -
Alju05g0416 461 FunFam Carboxypeptidase 316 460 - -
Alju05g0416 461 Gene3D alpha/beta hydrolase 28 292 IPR029058 -
Alju05g0416 461 Gene3D - 318 461 - -
Alju05g0416 461 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 445 IPR001563 GO:0004185|GO:0006508
Alju05g0416 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 121 133 IPR001563 GO:0004185|GO:0006508
Alju05g0416 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 193 IPR001563 GO:0004185|GO:0006508
Alju05g0416 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 428 441 IPR001563 GO:0004185|GO:0006508
Alju05g0416 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 134 144 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0416 Alju-ChrAlju05 6770669 6777072 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0416 29 58 Calmodulin-binding Proteins AT2G22960 63.333 3.58e-06 45.8