Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0407 ATGTTCGGTTCTGCCAGTTTCCAACGCAACCAACCGAAGAAGAAGAAAGACACCGAGTTGCAACCTCTGGTTCAAATGTTGAGCACCTTATCCACAAATACCAAAATGCAAAGACAAGAAGGCCAAAAGCGTAGAATGAAGGAGATTCTTGTTGTTGGTCTTATTTTGTTGCTGACTTGTTCCCAAGTAGCAACTTCTGGTTCACATGTTGAGTACCTTCCTGGTTTTGAAGGTCCCCTTCCTTTTCATCTTGAAACTGGGTATGTGGGAGTGGGAGACTCAGCAGCAGAAGAAGGAGCAGGAGAAGTGTTCTATTACTTTATTGAGTCAGAGAACAATCCACAAGAGGACCCTCTTATGCTTTGGCTCACTGGTGGCCCCGGTTGCTCTTCATTCACAGGCCTCGTTTTTGAAATAGGTCCAATCGCATTCAAAGTTGAGAAATACAATGGTAGCCTCCCAAATTTGGTTTTGAGGCCACAAGCCTGGACAAAGGCATGCAGTATAATATTTGTAGATTTGCCTCTTGACAGTGGCTTCTCTTATGCAAATACCTCTCATATTCAACGAAGTGATTGGATTTTAATTAAACATGCTCATCAATTTCTTAGAAAGTGGCTAACTGATCACCCAAAATTTCAAACAAATCAAGTTTATATTGGTGGTGACTCATATTCTGGTGTTCCGCTTCCTGGTATTGTTCAAGAAATTTCAAATGGAAATGATGAAGGAATCCAGCCATGGATAAATCTCCAGGGATATGTGCTAGGGAATCCCGACACAACTTTGGAAGAAGAAAATTATTTACCCGCATTTGCTCATGGAATGGCACTCATTTCCGATGAACTTTATATGTCCTTGCAGCAAAATTGTAAAGGAAATTATTTAAAAATAGATCCCGAAAATCAATTATGTCTGAGAGACATCAACGCATTACATAAGTTCTTGTCAGGGCTTAATTTATTTCACACTTTGGAACCCAAATGTGAGTTGGCTTCGCCTAGACCTCATAGACCTCATGGATTTTGGAGTAGAAGGTCTCTCATCAACAAATTTCGAAGGCCTCTTAGTTCTCGCCTTGCAAGGCCACCTTTAAATTGCAAGAGCTATGTATATTTCTTCAGCTACGATTGGCTTGGGGATGACAAAGTTCAGGAGGCCCTAAATATTCGAAAGGGTACCATAAAGAATTGGCAACGTTGTAACACCTTTGACTATAATTTTACCATCAGCAGTGCCTTTCCATATCACGTAAATCTAAGCCAAAAAGGCTATCGATCTTTGATTTATAGTGGAGATCATGACCCAGCAGTTTCATTCATTTCGACTCAAGCATGGATCAGAGATTTAAACTACTCCATTGTTGAAGACTGGAGACCTTGGCTTGTCAATGGCCAGGTTGCAGGATATACGAGAAGGTATTCTAATCAGATGACATTCGCCACTGTAAAGGGTGCAGGACATATGGCTCCTGAGTATAAACCTGAAGAATGTTTTGAGATGTTCATTCGGTGGATATCTAACAAGCCTTTGTGA 1536 0.4089 MFGSASFQRNQPKKKKDTELQPLVQMLSTLSTNTKMQRQEGQKRRMKEILVVGLILLLTCSQVATSGSHVEYLPGFEGPLPFHLETGYVGVGDSAAEEGAGEVFYYFIESENNPQEDPLMLWLTGGPGCSSFTGLVFEIGPIAFKVEKYNGSLPNLVLRPQAWTKACSIIFVDLPLDSGFSYANTSHIQRSDWILIKHAHQFLRKWLTDHPKFQTNQVYIGGDSYSGVPLPGIVQEISNGNDEGIQPWINLQGYVLGNPDTTLEEENYLPAFAHGMALISDELYMSLQQNCKGNYLKIDPENQLCLRDINALHKFLSGLNLFHTLEPKCELASPRPHRPHGFWSRRSLINKFRRPLSSRLARPPLNCKSYVYFFSYDWLGDDKVQEALNIRKGTIKNWQRCNTFDYNFTISSAFPYHVNLSQKGYRSLIYSGDHDPAVSFISTQAWIRDLNYSIVEDWRPWLVNGQVAGYTRRYSNQMTFATVKGAGHMAPEYKPEECFEMFIRWISNKPL 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0407 511 FunFam Serine carboxypeptidase-like 11 64 511 - -
Alju05g0407 511 SUPERFAMILY alpha/beta-Hydrolases 70 510 IPR029058 -
Alju05g0407 511 MobiDBLite consensus disorder prediction 1 20 - -
Alju05g0407 511 FunFam Carboxypeptidase 366 510 - -
Alju05g0407 511 Pfam Serine carboxypeptidase 74 508 IPR001563 GO:0004185|GO:0006508
Alju05g0407 511 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 68 495 IPR001563 GO:0004185|GO:0006508
Alju05g0407 511 FunFam Carboxypeptidase 413 508 - -
Alju05g0407 511 Gene3D - 368 511 - -
Alju05g0407 511 Gene3D alpha/beta hydrolase 64 336 IPR029058 -
Alju05g0407 511 PRINTS Carboxypeptidase C serine protease (S10) family signature 478 491 IPR001563 GO:0004185|GO:0006508
Alju05g0407 511 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 182 IPR001563 GO:0004185|GO:0006508
Alju05g0407 511 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 171 IPR001563 GO:0004185|GO:0006508
Alju05g0407 511 PRINTS Carboxypeptidase C serine protease (S10) family signature 206 231 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0407 Alju-ChrAlju05 6442949 6448762 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0407 64 98 Calmodulin-binding Proteins AT2G22960 62.857 1.01e-07 50.4