Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0406 ATGCGAAGACAAGAAGGCCAAAATAGTATAATGAAGGAGATTCTAGTTATTGCTCTTATTTTGTTGCAGACTTGTTCCCAAGTTGCAACTTCTGGTTCACATGTTGAGTCCCTTCCTGGTTTTGAAGGTCCTCTACCTTTTCATCTTGAAACTGGGTATGTGGGAGTGGGAGACTCAGCAGCAGAAGGAGCAGGAGAAGTGTTCTATTACTTTATTGAGTCACAGAACAATCCAAAAGAGGACCCTCTTATGCTTTGGCTCACTGGTGGCCCCGGTTGCTCTTCATTCTCAGGCCTCATTTTTGAAATAGGTCCAATCAAACCCAAAATTGAGGAATACAATGGTGGTCTCCCAAATATGGTTTTGAGGCCACAAGCGTGGACAAAGGCATGCAGTATAATATTTGTAGATTTGCCTCTTGGCAGTGGCTTCTCTTATGCAAACCCCCCTTATCTTCACCGAGGTGATTGGAGTTTAATTAAACATGCCCATCAATTTCTTAGAAAGTGGCTAATTGATCACCCGAGATTTCTGTCAAATCAAGTTTATATTGGTGGTGACTCATATTCTGGTGTTCCGCTTCCTGGTATTGTTCAAGAAATTTCAAATGGAAATGAAGAAGGAATCCAACCATGGATAAGTCTTCAGGGATATGTGCTAGGGAATCCGGTTACAACAATGGAAGAAGAAAGTTATTTACCATCATTTGCTCATGGAATGGCACTCATTTCCGATGAACTTTATATGTCCTTGCAGAGAAATTGTAAAGGGAATTATATAAATATAGATCCCGAAAATCAATTATGTCTGAGAGAGCTCAAAACTTTACACGAGCTCATGTCTGGACTTGATATACATTTCACTTTGGAATCTAAATGTGGGTTGGCTTCACCTAGGCCTCATGGCTTTTGGAGTACGAGATCTCTCATCAACAAATTTCGAAGGGATCTTAGTTCTCACCCTCAAATACCACCTATGAGCTGCAGAAGTTTTGGATATTTCCTGGCTTATGAATGGATTCGGGATAGCAGAGTTCAGGAGGCACTGCATATTCGAAAGAGTGCCATAAGGGATTGGATAGTTTGTAAACCTGAAGACTATGATTTCGACATCATCAATTCCGTTCCATATCATGCGAATCTAAGTCAAAAAGGCTATCGTTCGTTGATTTACAGTGGAGATCATGACCCTGTAGTTCCATTTATGTCAACTCAAGCATGGATTAGAGATTTAAACTACTCCATTGTTGAAGACTGGAGACCTTGGCTTGCCAATGGCCAGGTTGCAGGATATACGAGAAGGTATTCTAATCAGATGACATTCGCCACTGTAAAGGGTGGGGGACACACAGCTCCTGAGTACCAACCTACAGAAAGTTTTGAGATGTTCATTCGGTGGATATCTAATAAGCCTTTGTAG 1419 0.4123 MRRQEGQNSIMKEILVIALILLQTCSQVATSGSHVESLPGFEGPLPFHLETGYVGVGDSAAEGAGEVFYYFIESQNNPKEDPLMLWLTGGPGCSSFSGLIFEIGPIKPKIEEYNGGLPNMVLRPQAWTKACSIIFVDLPLGSGFSYANPPYLHRGDWSLIKHAHQFLRKWLIDHPRFLSNQVYIGGDSYSGVPLPGIVQEISNGNEEGIQPWISLQGYVLGNPVTTMEEESYLPSFAHGMALISDELYMSLQRNCKGNYINIDPENQLCLRELKTLHELMSGLDIHFTLESKCGLASPRPHGFWSTRSLINKFRRDLSSHPQIPPMSCRSFGYFLAYEWIRDSRVQEALHIRKSAIRDWIVCKPEDYDFDIINSVPYHANLSQKGYRSLIYSGDHDPVVPFMSTQAWIRDLNYSIVEDWRPWLANGQVAGYTRRYSNQMTFATVKGGGHTAPEYQPTESFEMFIRWISNKPL 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0406 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 135 IPR001563 GO:0004185|GO:0006508
Alju05g0406 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 136 146 IPR001563 GO:0004185|GO:0006508
Alju05g0406 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 439 452 IPR001563 GO:0004185|GO:0006508
Alju05g0406 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 195 IPR001563 GO:0004185|GO:0006508
Alju05g0406 472 Gene3D alpha/beta hydrolase 39 472 IPR029058 -
Alju05g0406 472 Pfam Serine carboxypeptidase 39 469 IPR001563 GO:0004185|GO:0006508
Alju05g0406 472 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 456 IPR001563 GO:0004185|GO:0006508
Alju05g0406 472 FunFam Serine carboxypeptidase-like 19 28 299 - -
Alju05g0406 472 SUPERFAMILY alpha/beta-Hydrolases 35 471 IPR029058 -
Alju05g0406 472 FunFam Carboxypeptidase 327 471 - -
Alju05g0406 472 FunFam Carboxypeptidase 374 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0406 Alju-ChrAlju05 6419923 6425414 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0406 29 57 Calmodulin-binding Proteins AT2G22960 72.414 7.83e-07 47.8