Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0402 ATGCGAAGAAAACAGGAAGGTCCAAATTGTAGATTATATGAGATTATTGTTGTCATTGTTATTTTATTGCATATTTGTTCCCATGGTGCAACTTCTGGTTCACATGTTAATGAGTACCTTCCTAATTTTAAAGGCCCTCTTCCTTTCCATTTTGAAATTGGATTTGTTCCCAAGTTGCAATTTCTTGTTCACATGCTGATGAGTACCTTCTTGAAGAAGAAGAAGAGGGACACCAAAATCCGAAGAAGACAAGAAGGTCAAAATCGTAGGATGATAGAGATTCTTGTTTTTTCTTTTGGTTTGTTGCAGATTTGTTCTCAAGTTACAGCTTCTGGTTCACATGTGGAGTACCTTCCTGGTTTTGAAGGCCCTCTTCCTTTTCATCTTGAAACTGGGTATGTGGGATTGGGAGACTCAGCAACAGAACAAGGAGGAGGACAAGTGTTCTATTACTTTATTGAGTCAGAGAACAATCCAAAAGAAAACCCTCTTATGCTTTGGCTCACTGGTGGCCCTGGTTGCTCTTCATTCTCAGGCCTCATCTTTGAAATAGGTCCAATCGCATTAAAAGTTGAGAAATACAATGGTAGCCTCCCAAATTTGGTTTTGAGGCCACAAGCTTGGACAAAGGCATGCAGTATAATATTTGTAGATTTGCCTCTTGGTAGTGGCTTCTCTTATGCATACACCCCTTATCTTCAACGAAGTGATTGGGGTTTGATTAAACATGCCCATCAATTTCTTAGAAAGTGGCTAATTGATCACCCAAGATTTCTATCAAATCAAGTTTATATTGGTGGTGACTCATATTCTGGCATTCCTATTCCTGCTATTGTTCAAGAAATTTCAAATGGAAATGAAGAAGGAATCCAGCCATGGATAAATCTCCAGGGATATGTGCTAGGGAATCCTGTCACAACAAAGGAAGAAGAAAATTATTTACCCTCATTTGCTCATGGATTGGCACTCATTTCCGATGAACTTTATATGTCGTTGCAGAAAAATTGTAAAGGAAATTATAAAAATGTAGATCCCGAAAATCAATCATGTCTGAGAGACCTTAACACCTTGCATGAGGTCATGTCCAGACTTGATAACTTTTGCATTTTGGATCCCATTTGTGAGATGGCTTCTCCTAGGCCTCATGGATTTTGGAGTAGGAGATCTCTCATCAACAAATTTCGAAGGCATCTTAGTTCTCGCCTTTCAAGGCCACCTCTAAGCTGCAGAAGTTATGCATATTTCCTTGTCTACGATTGGATAGAGGATGATAGAGTTCTGGAGGCACTGCATATTCGAAAGGGTACCATAAAGAATTGGCAACGTTGTAACCCCTCTAACTATGATTTTGACGACATCAATGCCTTTACATATCACGTAAATCTAAGCCAAAAAGGCTATCGATCTTTGATTTACAATGGAGATCATGATGCAGTGGTTCCATTTATGTCAACTCAAGCATGGATTAGAGATTTAAACTACTCCATTGTTGAAGACTGGAGACCTTGGCTTGTCAACAGCCAGGTTGCAGGATATACGAGAAGGTATTCTAATCAGATGACATTCGCCACCATAAAGGGTGCAGGACATGTAGCTCCTGAGTACAAATCTGAAGAATGTTATGAGATGTTCATTAGTTGGATATCTAATAAGCCATTGTAA 1662 0.3923 MRRKQEGPNCRLYEIIVVIVILLHICSHGATSGSHVNEYLPNFKGPLPFHFEIGFVPKLQFLVHMLMSTFLKKKKRDTKIRRRQEGQNRRMIEILVFSFGLLQICSQVTASGSHVEYLPGFEGPLPFHLETGYVGLGDSATEQGGGQVFYYFIESENNPKENPLMLWLTGGPGCSSFSGLIFEIGPIALKVEKYNGSLPNLVLRPQAWTKACSIIFVDLPLGSGFSYAYTPYLQRSDWGLIKHAHQFLRKWLIDHPRFLSNQVYIGGDSYSGIPIPAIVQEISNGNEEGIQPWINLQGYVLGNPVTTKEEENYLPSFAHGLALISDELYMSLQKNCKGNYKNVDPENQSCLRDLNTLHEVMSRLDNFCILDPICEMASPRPHGFWSRRSLINKFRRHLSSRLSRPPLSCRSYAYFLVYDWIEDDRVLEALHIRKGTIKNWQRCNPSNYDFDDINAFTYHVNLSQKGYRSLIYNGDHDAVVPFMSTQAWIRDLNYSIVEDWRPWLVNSQVAGYTRRYSNQMTFATIKGAGHVAPEYKSEECYEMFISWISNKPL 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0402 553 FunFam Carboxypeptidase 408 552 - -
Alju05g0402 553 FunFam Carboxypeptidase 456 550 - -
Alju05g0402 553 SUPERFAMILY alpha/beta-Hydrolases 115 552 IPR029058 -
Alju05g0402 553 Gene3D alpha/beta hydrolase 122 553 IPR029058 -
Alju05g0402 553 PRINTS Carboxypeptidase C serine protease (S10) family signature 217 227 IPR001563 GO:0004185|GO:0006508
Alju05g0402 553 PRINTS Carboxypeptidase C serine protease (S10) family signature 251 276 IPR001563 GO:0004185|GO:0006508
Alju05g0402 553 PRINTS Carboxypeptidase C serine protease (S10) family signature 204 216 IPR001563 GO:0004185|GO:0006508
Alju05g0402 553 PRINTS Carboxypeptidase C serine protease (S10) family signature 520 533 IPR001563 GO:0004185|GO:0006508
Alju05g0402 553 Pfam Serine carboxypeptidase 119 550 IPR001563 GO:0004185|GO:0006508
Alju05g0402 553 FunFam Serine carboxypeptidase-like 11 109 553 - -
Alju05g0402 553 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 113 536 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0402 Alju-ChrAlju05 6262326 6269981 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0402 420 553 Calmodulin-binding Proteins AT2G22960 60.000 1.03e-51 173